G28748



Basic Information


Item Value
gene id G28748
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 20483441 ~ 20484014 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU38212
GAAATACTTAGGAAAATGGGTCATTCCCGACATTGCTCTGAGGAACAGCAgactttgattaaaaagttGATTGGAGAGGGGAAAACATATAAAGAAGTGCAGAAAATGATTGGCTGCTCAGCCAAAATGATTTCAAATGCCTTGAAATGGCGTCCAAAGCCTGAACGACATGGGAAAAAATGGTCAACTACCATTCGAATGGATTGAAGAATAGCCAAAATGGCAAAGGCTCAACCAATAATCAGCTCCAGGAAAATCAAAGAAGACTTAAAGTTACCTGGGCCGCAGACAGTTTGTCCGACGACCCCCATGCACTGAATTCAAGCCACAGTACTGTGAAGACAGTAAAGCATGGTGGTGCAAAAATCATGTTATGgggatgtttctcatactgtggTGTTGGGCCTATTTATCGCATACCAGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU38212 True 425 lncRNA 0.43 2 20483441 20484014

Neighbor


gene id symbol gene type direction distance location
LOC120556479 NA coding downstream 204255 20253713 ~ 20279186 (-)
gpalpp1 gpalpp1 coding downstream 971728 19508685 ~ 19511713 (-)
gtf2f2a gtf2f2 coding downstream 974909 19500529 ~ 19508532 (-)
LOC120555523 LOC103359460,LOC102291763,LOC102215599,LOC101468151 coding downstream 988028 19459171 ~ 19495413 (-)
marchf7 LOC104963329 coding downstream 1125074 19343424 ~ 19358367 (-)
pcdh17 LOC104926281,LOC104949434 coding upstream 436930 20920944 ~ 20990225 (-)
LOC120556394 LOC104958904,LOC103352838,LOC105933796,LOC103378628,LOC107088303,LOC107687747 coding upstream 868517 21352531 ~ 21362696 (-)
txnl4b txnl4b coding upstream 884898 21368912 ~ 21371958 (-)
blzf1 blzf1 coding upstream 890200 21374214 ~ 21380699 (-)
LOC120556407 atp4b,LOC102779491 coding upstream 931193 21415207 ~ 21419254 (-)
G28747 NA non-coding downstream 2951 20479875 ~ 20480490 (-)
G28726 NA non-coding downstream 58702 20424419 ~ 20424739 (-)
G28722 LOC103376870 non-coding downstream 127097 20356047 ~ 20356344 (-)
LOC120556571 NA non-coding downstream 168019 20141233 ~ 20315422 (-)
G28697 NA non-coding downstream 369079 20114023 ~ 20114362 (-)
G28774 NA non-coding upstream 280697 20764711 ~ 20764937 (-)
G28782 NA non-coding upstream 392018 20876032 ~ 20876286 (-)
G28793 NA non-coding upstream 589536 21073550 ~ 21073904 (-)
G28796 NA non-coding upstream 654035 21138049 ~ 21138377 (-)
G28797 NA non-coding upstream 737122 21221136 ~ 21221445 (-)
LOC120555836 pcnp other downstream 1357030 19123541 ~ 19126411 (-)
LOC120555695 NA other downstream 1413445 19054091 ~ 19069996 (-)
G28345 NA other downstream 1763422 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 1824782 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 2062942 18416069 ~ 18420499 (-)
LOC120555658 NA other upstream 1095954 21579968 ~ 21583558 (-)
G28933 NA other upstream 1097028 21581042 ~ 21583498 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 1402574 21886588 ~ 22051625 (-)
LOC120555944 LOC103365297,LOC100709700,LOC102795695,LOC102312860 other upstream 1786856 22270870 ~ 22336817 (-)
cbfa2t3 cbfa2t3,LOC102789151 other upstream 2064686 22548700 ~ 22601557 (-)

Expression



Co-expression Network