G28770



Basic Information


Item Value
gene id G28770
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 20711104 ~ 20761147 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU38234
cggccttcatcattagacgtgagttaatttcacatcagcagtactgGCAAGTCCGACTACTGGGTCAGCTAGAGGAGTGCACTCCAGAGGCTGGTAGACATTCAGTGTTTTGCTCAAGCACTTCAGCTGGATGAACGCTTGTCATCTCTTAGGTTTAAACCCAGGCCCTCCAGTTGAAGGAAGATGTCCCTCCTCACTTCACCACCTGCTGCCCTGTCCTGTGTGCATtctgggaccgaaTGCtgtcctccaagatgacaacgctCGCCCCCACAGCACGGGGTTTATCAGggactacctccagaatgtgggagtggagaggatggaatggcctgccagcagtcctgacctcaaccccattgaacacttgtgggatcagcttgggcgtgctgtttgtgccagagtgaccaacacaaccacgttggctgacttgcgacaaatgctggttgaagaatgggatgccatcccacagcagtgtgtgaccaggctggtaaCCAGCAttaggaggaggtgccaggctgttgtggctgtgtatagTTCTTCCATacctactgaggctcctgtttgtgaaattaataaattgttgaattgcc

Function


GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA


RNA id representative length rna type GC content exon number start site end site
TU38234 True 593 TUCP 0.52 3 20711104 20761147

Neighbor


gene id symbol gene type direction distance location
LOC120555780 diaph3 coding upstream 18130 20504098 ~ 20692974 (+)
LOC120555422 pcdh20 coding upstream 264331 20442399 ~ 20446773 (+)
pou4f1 pou4f1,LOC103143517,LOC106914826 coding upstream 1093652 19614845 ~ 19617452 (+)
obi1 NA coding upstream 1097379 19606123 ~ 19613725 (+)
rbm26 rbm26 coding upstream 1149379 19549354 ~ 19561725 (+)
LOC120556481 NA coding downstream 525696 21286843 ~ 21287974 (+)
nkpd1 LOC104962748 coding downstream 570006 21331153 ~ 21352064 (+)
trmt10c NA coding downstream 611010 21372157 ~ 21374142 (+)
ercc5 ercc5,LOC104958986 coding downstream 620062 21381209 ~ 21390547 (+)
LOC120556135 tmem255b coding downstream 673112 21434259 ~ 21453303 (+)
G28745 NA non-coding upstream 130989 20579142 ~ 20580115 (+)
G28721 LOC103376870 non-coding upstream 354750 20356072 ~ 20356354 (+)
G28696 NA non-coding upstream 596744 20113987 ~ 20114360 (+)
LOC120555794 NA non-coding upstream 738864 19971219 ~ 19972240 (+)
G28590 NA non-coding upstream 1199362 19511014 ~ 19511742 (+)
G28776 NA non-coding downstream 16396 20777543 ~ 20777816 (+)
G28777 NA non-coding downstream 36265 20797412 ~ 20797671 (+)
G28778 NA non-coding downstream 65077 20826224 ~ 20826477 (+)
G28792 NA non-coding downstream 312394 21073541 ~ 21073755 (+)
LOC120555568 NA non-coding downstream 381578 21142725 ~ 21143190 (+)
LOC120555792 pcdh9,LOC102784100 other upstream 717150 19772119 ~ 19993954 (+)
ercc3 ercc3 other upstream 1190886 19512356 ~ 19520218 (+)
G28581 NA other upstream 1223571 19487246 ~ 19487533 (+)
LOC120555697 NA other upstream 1624040 19074308 ~ 19087064 (+)
LOC120556478 LOC103360749,LOC104942123,LOC102301404 other upstream 2135162 18561873 ~ 18575942 (+)
G28826 NA other downstream 635066 21396213 ~ 21403450 (+)
grk1a grk1 other downstream 659963 21421110 ~ 21433147 (+)
tpp2 tpp2 other downstream 764445 21525592 ~ 21562814 (+)
dcun1d2b dcun1d2,LOC102792160 other downstream 835184 21596331 ~ 21603906 (+)
gpc5a gpc5,LOC103365231 other downstream 958887 21720034 ~ 21872025 (+)

Expression



Co-expression Network