G28774


Basic Information

Item Value
gene id G28774
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 20764711 ~ 20764937 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU38239
ggagtgagggaggagctgcttacactctacgttacgttacacactttcactggcaatcacatcatagccacgccctaaaacaccccctgctttattgccgattttaaaatcaacgagaccataattcaaaaatgaacatcattctgtgttgcagaagaaactagcgattgagaccataaactcattatgaaaatgtttactgaggtaataaatcaagtgagaagtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38239 True 227 lncRNA 0.40 1 20764711 20764937

Neighbor

gene id symbol gene type direction distance location
tdrd3 tdrd3 coding downstream 266986 20475627 ~ 20497725 (-)
LOC120556479 NA coding downstream 485525 20253713 ~ 20279186 (-)
gpalpp1 gpalpp1 coding downstream 1252998 19508685 ~ 19511713 (-)
gtf2f2a gtf2f2 coding downstream 1256179 19500529 ~ 19508532 (-)
LOC120555523 LOC103359460,LOC102291763,LOC102215599,LOC101468151 coding downstream 1269298 19459171 ~ 19495413 (-)
pcdh17 LOC104926281,LOC104949434 coding upstream 156007 20920944 ~ 20990225 (-)
LOC120556394 LOC104958904,LOC103352838,LOC105933796,LOC103378628,LOC107088303,LOC107687747 coding upstream 587594 21352531 ~ 21362696 (-)
txnl4b txnl4b coding upstream 603975 21368912 ~ 21371958 (-)
blzf1 blzf1 coding upstream 609277 21374214 ~ 21380699 (-)
LOC120556407 atp4b,LOC102779491 coding upstream 650270 21415207 ~ 21419254 (-)
G28748 NA non-coding downstream 280697 20483441 ~ 20484014 (-)
G28747 NA non-coding downstream 284221 20479875 ~ 20480490 (-)
G28726 NA non-coding downstream 339972 20424419 ~ 20424739 (-)
G28722 LOC103376870 non-coding downstream 408367 20356047 ~ 20356344 (-)
LOC120556571 NA non-coding downstream 449289 20141233 ~ 20315422 (-)
G28782 NA non-coding upstream 111095 20876032 ~ 20876286 (-)
G28793 NA non-coding upstream 308613 21073550 ~ 21073904 (-)
G28796 NA non-coding upstream 373112 21138049 ~ 21138377 (-)
G28797 NA non-coding upstream 456199 21221136 ~ 21221445 (-)
G28799 NA non-coding upstream 481414 21246351 ~ 21246566 (-)
LOC120555836 pcnp other downstream 1638300 19123541 ~ 19126411 (-)
LOC120555695 NA other downstream 1694715 19054091 ~ 19069996 (-)
G28345 NA other downstream 2044692 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 2106052 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 2344212 18416069 ~ 18420499 (-)
LOC120555658 NA other upstream 815031 21579968 ~ 21583558 (-)
G28933 NA other upstream 816105 21581042 ~ 21583498 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 1121651 21886588 ~ 22051625 (-)
LOC120555944 LOC103365297,LOC100709700,LOC102795695,LOC102312860 other upstream 1505933 22270870 ~ 22336817 (-)
cbfa2t3 cbfa2t3,LOC102789151 other upstream 1783763 22548700 ~ 22601557 (-)

Expression


Co-expression Network