G28777



Basic Information


Item Value
gene id G28777
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 20797412 ~ 20797671 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU38242
ctttctcccttttctgccgagtggcgcacgtgcccgctcgcgatgtgaagcgcgtgtccgcgctattcccccgacatgcactctacaatcactgctgatagacggctttctGTACACActccaaaacggacgtaaaaatatcacactttctgtagtctaccgttagctagctaccgtaaatgtaggctacttttgccatattttccctccgggctcaccaaaacggacgtgaaagcatattaaccattcactgactgcac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU38242 True 260 lncRNA 0.50 1 20797412 20797671

Neighbor


gene id symbol gene type direction distance location
LOC120555780 diaph3 coding upstream 104438 20504098 ~ 20692974 (+)
LOC120555422 pcdh20 coding upstream 350639 20442399 ~ 20446773 (+)
pou4f1 pou4f1,LOC103143517,LOC106914826 coding upstream 1179960 19614845 ~ 19617452 (+)
obi1 NA coding upstream 1183687 19606123 ~ 19613725 (+)
rbm26 rbm26 coding upstream 1235687 19549354 ~ 19561725 (+)
LOC120556481 NA coding downstream 489172 21286843 ~ 21287974 (+)
nkpd1 LOC104962748 coding downstream 533482 21331153 ~ 21352064 (+)
trmt10c NA coding downstream 574486 21372157 ~ 21374142 (+)
ercc5 ercc5,LOC104958986 coding downstream 583538 21381209 ~ 21390547 (+)
LOC120556135 tmem255b coding downstream 636588 21434259 ~ 21453303 (+)
G28776 NA non-coding upstream 19596 20777543 ~ 20777816 (+)
G28745 NA non-coding upstream 217297 20579142 ~ 20580115 (+)
G28721 LOC103376870 non-coding upstream 441058 20356072 ~ 20356354 (+)
G28696 NA non-coding upstream 683052 20113987 ~ 20114360 (+)
LOC120555794 NA non-coding upstream 825172 19971219 ~ 19972240 (+)
G28778 NA non-coding downstream 28553 20826224 ~ 20826477 (+)
G28792 NA non-coding downstream 275870 21073541 ~ 21073755 (+)
LOC120555568 NA non-coding downstream 345054 21142725 ~ 21143190 (+)
G28804 NA non-coding downstream 523641 21321312 ~ 21321625 (+)
G28812 NA non-coding downstream 559661 21357332 ~ 21456540 (+)
G28770 NA other upstream 36265 20711104 ~ 20761147 (+)
LOC120555792 pcdh9,LOC102784100 other upstream 803458 19772119 ~ 19993954 (+)
ercc3 ercc3 other upstream 1277194 19512356 ~ 19520218 (+)
G28581 NA other upstream 1309879 19487246 ~ 19487533 (+)
LOC120555697 NA other upstream 1710348 19074308 ~ 19087064 (+)
G28826 NA other downstream 598542 21396213 ~ 21403450 (+)
grk1a grk1 other downstream 623439 21421110 ~ 21433147 (+)
tpp2 tpp2 other downstream 727921 21525592 ~ 21562814 (+)
dcun1d2b dcun1d2,LOC102792160 other downstream 798660 21596331 ~ 21603906 (+)
gpc5a gpc5,LOC103365231 other downstream 922363 21720034 ~ 21872025 (+)

Expression



Co-expression Network