G28792


Basic Information

Item Value
gene id G28792
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 21073541 ~ 21073755 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU38260
CCgtagacaaaaggaaatgccatgttttgagaaattaaatgttttatagtctgcctaacatggttaataaaccaacatatattttttttattcatgccgataacaaactgcgctaaaatgcgcctgatccagactgaatgaatgaatgaggaaatgaaagagcgctgtgtcagagggaggagactgagaggaactcgaggtttcttgaagaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38260 True 215 lncRNA 0.38 1 21073541 21073755

Neighbor

gene id symbol gene type direction distance location
LOC120555780 diaph3 coding upstream 380567 20504098 ~ 20692974 (+)
LOC120555422 pcdh20 coding upstream 626768 20442399 ~ 20446773 (+)
pou4f1 pou4f1,LOC103143517,LOC106914826 coding upstream 1456089 19614845 ~ 19617452 (+)
obi1 NA coding upstream 1459816 19606123 ~ 19613725 (+)
rbm26 rbm26 coding upstream 1511816 19549354 ~ 19561725 (+)
LOC120556481 NA coding downstream 213088 21286843 ~ 21287974 (+)
nkpd1 LOC104962748 coding downstream 257398 21331153 ~ 21352064 (+)
trmt10c NA coding downstream 298402 21372157 ~ 21374142 (+)
ercc5 ercc5,LOC104958986 coding downstream 307454 21381209 ~ 21390547 (+)
LOC120556135 tmem255b coding downstream 360504 21434259 ~ 21453303 (+)
G28778 NA non-coding upstream 247064 20826224 ~ 20826477 (+)
G28777 NA non-coding upstream 275870 20797412 ~ 20797671 (+)
G28776 NA non-coding upstream 295725 20777543 ~ 20777816 (+)
G28745 NA non-coding upstream 493426 20579142 ~ 20580115 (+)
G28721 LOC103376870 non-coding upstream 717187 20356072 ~ 20356354 (+)
LOC120555568 NA non-coding downstream 68970 21142725 ~ 21143190 (+)
G28804 NA non-coding downstream 247557 21321312 ~ 21321625 (+)
G28812 NA non-coding downstream 283577 21357332 ~ 21456540 (+)
LOC120556583 NA non-coding downstream 335897 21409652 ~ 21413209 (+)
G28875 NA non-coding downstream 541961 21615716 ~ 21616158 (+)
G28770 NA other upstream 312394 20711104 ~ 20761147 (+)
LOC120555792 pcdh9,LOC102784100 other upstream 1079587 19772119 ~ 19993954 (+)
ercc3 ercc3 other upstream 1553323 19512356 ~ 19520218 (+)
G28581 NA other upstream 1586008 19487246 ~ 19487533 (+)
LOC120555697 NA other upstream 1986477 19074308 ~ 19087064 (+)
G28826 NA other downstream 322458 21396213 ~ 21403450 (+)
grk1a grk1 other downstream 347355 21421110 ~ 21433147 (+)
tpp2 tpp2 other downstream 451837 21525592 ~ 21562814 (+)
dcun1d2b dcun1d2,LOC102792160 other downstream 522576 21596331 ~ 21603906 (+)
gpc5a gpc5,LOC103365231 other downstream 646279 21720034 ~ 21872025 (+)

Expression


Co-expression Network