G28804


Basic Information

Item Value
gene id G28804
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 21321312 ~ 21321625 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU38272
TCGGACGCAAAACTATGCTGTGGTGCATATTTCCACAATAATAGGCATGCCAGATGTGTAGCTTATTGTAGCCTCCTAATTTAAATCATTCAGGTTTGTTTTAGCTATGTGAAATCAACATGGACATGTCTTCACTAAAAACAGTGAGTGCATTTTACACAATTTGTGTAAACGGCACCGCATAGTGACTGACCTGCAAAAGCGTGTATTTAGATTGAAATCTTTTATGTGTCCAAAGCAAGTATTTATACCCATGACCCAATCAAACTGACCAGTCCTTACGCCATCGTTTATACCAATATAGTGAAACTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38272 True 314 lncRNA 0.38 1 21321312 21321625

Neighbor

gene id symbol gene type direction distance location
LOC120556481 NA coding upstream 33338 21286843 ~ 21287974 (+)
LOC120555780 diaph3 coding upstream 628338 20504098 ~ 20692974 (+)
LOC120555422 pcdh20 coding upstream 874539 20442399 ~ 20446773 (+)
pou4f1 pou4f1,LOC103143517,LOC106914826 coding upstream 1703860 19614845 ~ 19617452 (+)
obi1 NA coding upstream 1707587 19606123 ~ 19613725 (+)
nkpd1 LOC104962748 coding downstream 9528 21331153 ~ 21352064 (+)
trmt10c NA coding downstream 50532 21372157 ~ 21374142 (+)
ercc5 ercc5,LOC104958986 coding downstream 59584 21381209 ~ 21390547 (+)
LOC120556135 tmem255b coding downstream 112634 21434259 ~ 21453303 (+)
adprhl1 adprhl1,LOC102790835 coding downstream 283492 21605117 ~ 21613287 (+)
LOC120555568 NA non-coding upstream 178122 21142725 ~ 21143190 (+)
G28792 NA non-coding upstream 247557 21073541 ~ 21073755 (+)
G28778 NA non-coding upstream 494835 20826224 ~ 20826477 (+)
G28777 NA non-coding upstream 523641 20797412 ~ 20797671 (+)
G28776 NA non-coding upstream 543496 20777543 ~ 20777816 (+)
G28812 NA non-coding downstream 35707 21357332 ~ 21456540 (+)
LOC120556583 NA non-coding downstream 88027 21409652 ~ 21413209 (+)
G28875 NA non-coding downstream 294091 21615716 ~ 21616158 (+)
G28880 cul4a non-coding downstream 314906 21636531 ~ 21638081 (+)
G28976 NA non-coding downstream 396863 21718488 ~ 21718824 (+)
G28770 NA other upstream 560165 20711104 ~ 20761147 (+)
LOC120555792 pcdh9,LOC102784100 other upstream 1327358 19772119 ~ 19993954 (+)
ercc3 ercc3 other upstream 1801094 19512356 ~ 19520218 (+)
G28581 NA other upstream 1833779 19487246 ~ 19487533 (+)
LOC120555697 NA other upstream 2234248 19074308 ~ 19087064 (+)
G28826 NA other downstream 74588 21396213 ~ 21403450 (+)
grk1a grk1 other downstream 99485 21421110 ~ 21433147 (+)
tpp2 tpp2 other downstream 203967 21525592 ~ 21562814 (+)
dcun1d2b dcun1d2,LOC102792160 other downstream 274706 21596331 ~ 21603906 (+)
gpc5a gpc5,LOC103365231 other downstream 398409 21720034 ~ 21872025 (+)

Expression


Co-expression Network