G28875


Basic Information

Item Value
gene id G28875
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 21615716 ~ 21616158 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU38371
ATTTCAGTCTTGGTTGATTTAGAATGTttttgagtgaaaacaatgGAATTGTGCTGAGAATTTAGCAGTCTGGAGCATAGACACATGTCTATGGTCTGGAGGTTGTTTTATGTCTATGGTTGATACACGAGCTTCAGGTTTTCAGAATAGTGTGCACAGTTCCATTTTGAGATTACAGCTGTAAAGAAAACGACAACAACACAGTTGCCAGGTTCAACAGCCTCATAATAAATCCTACCTTCAAGAAGATTAATATGGTCTTTATGGCCATTATAGTGGCTGGTTGTAGTTGTGGCTGGAGTTTTAGAGGTGTTTTCTAATATTTTGTACACTCCATTTTTATATCAATCAGGCGAGACTAAATATTAATAACTACAGCCTCCGAAATGAACATTAAGTTCAATCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38371 True 408 lncRNA 0.37 2 21615716 21616158

Neighbor

gene id symbol gene type direction distance location
adprhl1 adprhl1,LOC102790835 coding upstream 2429 21605117 ~ 21613287 (+)
LOC120556135 tmem255b coding upstream 162413 21434259 ~ 21453303 (+)
ercc5 ercc5,LOC104958986 coding upstream 225169 21381209 ~ 21390547 (+)
trmt10c NA coding upstream 241574 21372157 ~ 21374142 (+)
nkpd1 LOC104962748 coding upstream 263652 21331153 ~ 21352064 (+)
tgfbrap1 tgfbrap1 coding downstream 34587 21650745 ~ 21667717 (+)
mrpl16 mrpl16,LOC102799737 coding downstream 52360 21668518 ~ 21674299 (+)
LOC120556067 NA coding downstream 58266 21674424 ~ 21681765 (+)
LOC120555410 LOC102205483,LOC101478550,LOC103365221,LOC100711032,LOC102299296,LOC102798867 coding downstream 83645 21699803 ~ 21709381 (+)
LOC120555860 NA coding downstream 295248 21911406 ~ 21921876 (+)
G28812 NA non-coding upstream 159176 21357332 ~ 21456540 (+)
LOC120556583 NA non-coding upstream 202507 21409652 ~ 21413209 (+)
G28804 NA non-coding upstream 294091 21321312 ~ 21321625 (+)
LOC120555568 NA non-coding upstream 472526 21142725 ~ 21143190 (+)
G28792 NA non-coding upstream 541961 21073541 ~ 21073755 (+)
G28880 cul4a non-coding downstream 20373 21636531 ~ 21638081 (+)
G28976 NA non-coding downstream 102330 21718488 ~ 21718824 (+)
G28990 NA non-coding downstream 270431 21886589 ~ 21889549 (+)
G29004 NA non-coding downstream 467787 22083945 ~ 22084401 (+)
G29005 NA non-coding downstream 512806 22128964 ~ 22129578 (+)
dcun1d2b dcun1d2,LOC102792160 other upstream 11810 21596331 ~ 21603906 (+)
tpp2 tpp2 other upstream 52902 21525592 ~ 21562814 (+)
grk1a grk1 other upstream 182569 21421110 ~ 21433147 (+)
G28826 NA other upstream 212266 21396213 ~ 21403450 (+)
G28770 NA other upstream 854569 20711104 ~ 20761147 (+)
gpc5a gpc5,LOC103365231 other downstream 103876 21720034 ~ 21872025 (+)
ankrd11 ankrd11 other downstream 1148561 22764719 ~ 22895007 (+)
LOC120555548 LOC103365626,LOC104942698 other downstream 1365625 22981783 ~ 22994164 (+)
G29292 NA other downstream 1520574 23136732 ~ 23137027 (+)
igdcc3 igdcc3 other downstream 1826991 23443149 ~ 23517263 (+)

Expression


Co-expression Network