G28933


Basic Information

Item Value
gene id G28933
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 21581042 ~ 21583498 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU38446
GATGTTGAAATTGGATTAACTGACCTAGAGAAGAAGCTCTGCAGGCACTTTAAGCGCATAGAGATCCAGGGAAAACGTCAAAGAAAGGTCCCTATCATCCTCACGCCAAATATGCTCTCATCCATGGAGGCTCTAGTTGAGAATCGCATACAATGTGGAGTTCCAAATGAAAACCACTTCCTGTTTGCAAGGCCTGAAGCACGAACACATCTTAGAGGATCAGATGCCATCCGACAACTTGCACGCAAGTGTGGGGCCAAGCATCCAGAGGCCCTGTCATCCACTAAATTGAGGAAACATGTGGCGACCATGTCAAAAGTCCTAAACTTGCGGGATAATGAAATGGATGACCTTGCCGACTTTCTTGGCCACGACATTAGAGTACACAGACAGTTCTACAGGCTTCCCGAGGGTACATTACAGCTCGCAAAGATCAGCAAAGTCCTTGTGGCCCTTGAGCGAGGACAAATCTCAGAGTTCAGAGGCAGGACCCTTGACGAGATCAGCATTGACCCAAATGAGGAAATGGCTGGGGACAGTAATCTATCTGAGAATGAGGAGTGTGAAATGACCCCGTTGCTTTTAACAGCCGGATCGAGGCGAAAAAGGAAGTGCACGACTGAAGTTGGATCTGACAGTGATTCACAGGAAACTACAGtgtgtccCGTGAGTAagactgcaacaaaaaaaagaccagATAACAAGAAGCCAGTGGGTGAAGACAAATCTCCAGGTGAATCCCAGATCACCAAAGGTTCATCAAAAATGGCGAGAAGGAAGTGGAGCACAGAGGAGGTCCAGGCTGTGGAGAGCAATCTCATGGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38446 True 826 TUCP 0.48 5 21581042 21583498

Neighbor

gene id symbol gene type direction distance location
mettl21e LOC104958888,LOC103365143 coding downstream 4830 21569249 ~ 21576212 (-)
LOC120555660 LOC103365134,LOC107103558,LOC103461963 coding downstream 12629 21562930 ~ 21568413 (-)
rasa3 rasa3,LOC102778059 coding downstream 35786 21484682 ~ 21545256 (-)
pros1 pros1 coding downstream 97430 21474934 ~ 21483612 (-)
gas6 gas6 coding downstream 108553 21454467 ~ 21472489 (-)
lamp1a lamp1 coding upstream 43251 21626749 ~ 21634370 (-)
cul4a cul4a coding upstream 52056 21635554 ~ 21648962 (-)
LOC120556066 LOC104958669 coding upstream 98373 21681871 ~ 21687213 (-)
LOC120556442 LOC100696715,LOC101476950,LOC104964868,LOC104922626 coding upstream 654404 22237902 ~ 22239568 (-)
slc5a7a LOC104964870,LOC103378848,LOC108250948,LOC104922633,LOC102796904 coding upstream 668842 22252340 ~ 22259634 (-)
G28799 NA non-coding downstream 334476 21246351 ~ 21246566 (-)
G28797 NA non-coding downstream 359597 21221136 ~ 21221445 (-)
G28796 NA non-coding downstream 442665 21138049 ~ 21138377 (-)
G28793 NA non-coding downstream 507138 21073550 ~ 21073904 (-)
G28782 NA non-coding downstream 704756 20876032 ~ 20876286 (-)
G29022 NA non-coding upstream 560755 22144253 ~ 22144464 (-)
G29023 samd3 non-coding upstream 578128 22161626 ~ 22162235 (-)
G29090 NA non-coding upstream 784633 22368131 ~ 22368562 (-)
G29089 LOC103139356,LOC103461942,LOC106928198 non-coding upstream 785838 22369336 ~ 22371707 (-)
G29095 NA non-coding upstream 809847 22393345 ~ 22393560 (-)
LOC120555836 pcnp other downstream 2454631 19123541 ~ 19126411 (-)
LOC120555695 NA other downstream 2511046 19054091 ~ 19069996 (-)
G28345 NA other downstream 2861023 18719372 ~ 18720019 (-)
LOC120556268 btbd1 other downstream 2922383 18650029 ~ 18658659 (-)
G28269 mapk6 other downstream 3160543 18416069 ~ 18420499 (-)
gpc6a LOC101477426,LOC100710496,LOC102798074,LOC103365236,LOC102217784 other upstream 303090 21886588 ~ 22051625 (-)
LOC120555944 LOC103365297,LOC100709700,LOC102795695,LOC102312860 other upstream 687372 22270870 ~ 22336817 (-)
cbfa2t3 cbfa2t3,LOC102789151 other upstream 965202 22548700 ~ 22601557 (-)
G29209 ankrd11 other upstream 1294133 22877631 ~ 22889042 (-)
dpep1 dpep1,LOC104948750,LOC103365623,LOC103378717,LOC103365607 other upstream 1328733 22912231 ~ 22919554 (-)

Expression


Co-expression Network