G29004



Basic Information


Item Value
gene id G29004
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 22083945 ~ 22084401 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU38533
atctgaccggggatcagttacaaattaattccactctttcaatctcaacCCGTTCTTAGAAAGCTGATCTTGGATCAGTGCgatgtaaacaacctgctctatgcccacccacctttatctttagccaatctacacagtgcatgcggccttctcccaatcattacattaaacaacttttattttattctgattggataattatcaccataatgattaatgcccattgggtaatacgggcttgatcgcagtttgccaacaaggggtgctgccgccaacaaggggtgctgccgcaCCCCCAGCACCCCTACTTCCCGCGCCTATGCACTACTCTGCCATAAAGCCCCAACTGGTGGAGGGCTGCAGCGATAGTTGACTTTGTGGAactttctcccatctccctactgcatctctggagctcagccacagtgatctttgggttcttctttacctctctcac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU38533 True 457 lncRNA 0.48 1 22083945 22084401

Neighbor


gene id symbol gene type direction distance location
LOC120555860 NA coding upstream 162069 21911406 ~ 21921876 (+)
LOC120555410 LOC102205483,LOC101478550,LOC103365221,LOC100711032,LOC102299296,LOC102798867 coding upstream 374564 21699803 ~ 21709381 (+)
LOC120556067 NA coding upstream 402180 21674424 ~ 21681765 (+)
mrpl16 mrpl16,LOC102799737 coding upstream 409646 21668518 ~ 21674299 (+)
tgfbrap1 tgfbrap1 coding upstream 416228 21650745 ~ 21667717 (+)
lmo7b NA coding downstream 105495 22189896 ~ 22227106 (+)
cdh16 cdh16 coding downstream 284950 22369351 ~ 22407710 (+)
rrad rrad coding downstream 289733 22374134 ~ 22377140 (+)
nae1 nae1 coding downstream 349110 22433511 ~ 22440373 (+)
dync1li2 dync1li2 coding downstream 387108 22471509 ~ 22488379 (+)
G28990 NA non-coding upstream 194396 21886589 ~ 21889549 (+)
G28976 NA non-coding upstream 365121 21718488 ~ 21718824 (+)
G28880 cul4a non-coding upstream 445864 21636531 ~ 21638081 (+)
G28875 NA non-coding upstream 467787 21615716 ~ 21616158 (+)
G28812 NA non-coding upstream 627405 21357332 ~ 21456540 (+)
G29005 NA non-coding downstream 44563 22128964 ~ 22129578 (+)
LOC120556188 NA non-coding downstream 75169 22159570 ~ 22160895 (+)
G29085 NA non-coding downstream 283728 22368129 ~ 22368503 (+)
G29101 NA non-coding downstream 323565 22407966 ~ 22408239 (+)
G29135 galns non-coding downstream 449541 22533942 ~ 22534868 (+)
gpc5a gpc5,LOC103365231 other upstream 211920 21720034 ~ 21872025 (+)
dcun1d2b dcun1d2,LOC102792160 other upstream 480039 21596331 ~ 21603906 (+)
tpp2 tpp2 other upstream 521131 21525592 ~ 21562814 (+)
grk1a grk1 other upstream 650798 21421110 ~ 21433147 (+)
G28826 NA other upstream 680495 21396213 ~ 21403450 (+)
ankrd11 ankrd11 other downstream 680318 22764719 ~ 22895007 (+)
LOC120555548 LOC103365626,LOC104942698 other downstream 897382 22981783 ~ 22994164 (+)
G29292 NA other downstream 1052331 23136732 ~ 23137027 (+)
igdcc3 igdcc3 other downstream 1358748 23443149 ~ 23517263 (+)
G29433 NA other downstream 1642611 23727012 ~ 23732471 (+)

Expression



Co-expression Network