G29176


Basic Information

Item Value
gene id G29176
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 22752468 ~ 22753645 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU38774
gtgaggttggatggagagcgtttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggataggtttatttgtgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgctttacgccaaacataacgttttgcattgttgccaagaagttcgattttggtttcatctgaccacagcaccttcttccacatgtttggtgtgtctcccaggtggcttttggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcagtatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctcctTCTCAGTCTTCTCAtcgtatgagctgaaagtttagagggacggccgggtcttcgtagatttgtagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttctccacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgctttacacggacctctgagactatcacagagcaggtgcatttatacggagacttgattacacacagctggattctatttatcatcattagtcatttaggtcaacattggatcattcagagatcttcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacggccactttttcagttttttatttgttaaaaaagtttgaaatagccaatgaatttcgttccacttcataattgggacgcacttgttgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38774 True 1178 lncRNA 0.43 1 22752468 22753645

Neighbor

gene id symbol gene type direction distance location
cdh15 cdh15 coding upstream 527 22713300 ~ 22751941 (+)
acsf3 acsf3 coding upstream 40534 22669904 ~ 22711934 (+)
trnag-ucc_7 NA coding upstream 205196 22547201 ~ 22547272 (+)
trappc2l trappc2l coding upstream 209472 22539280 ~ 22542996 (+)
cmtm4 cmtm4 coding upstream 244913 22489512 ~ 22507555 (+)
slc22a31 slc22a31 coding downstream 142697 22896342 ~ 22911278 (+)
sult5a1 NA coding downstream 170179 22923824 ~ 22929666 (+)
LOC120555841 LOC102215785,LOC102786096,LOC101482767,LOC104919260 coding downstream 191399 22945044 ~ 22960403 (+)
mcee mcee coding downstream 258954 23012599 ~ 23014909 (+)
mettl15 mettl15 coding downstream 351576 23105221 ~ 23158790 (+)
G29139 NA non-coding upstream 150909 22548700 ~ 22601559 (+)
G29135 galns non-coding upstream 217600 22533942 ~ 22534868 (+)
G29101 NA non-coding upstream 344229 22407966 ~ 22408239 (+)
G29085 NA non-coding upstream 383965 22368129 ~ 22368503 (+)
LOC120556188 NA non-coding upstream 591573 22159570 ~ 22160895 (+)
G29241 ist1 non-coding downstream 244057 22997702 ~ 23001049 (+)
G29243 mphosph10 non-coding downstream 251233 23004878 ~ 23007982 (+)
G29228 LOC100136564,LOC104919244,LOC103365615 non-coding downstream 262387 23016032 ~ 23019378 (+)
G29262 NA non-coding downstream 267784 23021429 ~ 23024754 (+)
G29271 NA non-coding downstream 291648 23045293 ~ 23089580 (+)
gpc5a gpc5,LOC103365231 other upstream 880443 21720034 ~ 21872025 (+)
dcun1d2b dcun1d2,LOC102792160 other upstream 1148562 21596331 ~ 21603906 (+)
tpp2 tpp2 other upstream 1189654 21525592 ~ 21562814 (+)
grk1a grk1 other upstream 1319321 21421110 ~ 21433147 (+)
G28826 NA other upstream 1349018 21396213 ~ 21403450 (+)
ankrd11 ankrd11 other downstream 11074 22764719 ~ 22895007 (+)
LOC120555548 LOC103365626,LOC104942698 other downstream 228138 22981783 ~ 22994164 (+)
G29292 NA other downstream 383087 23136732 ~ 23137027 (+)
igdcc3 igdcc3 other downstream 689504 23443149 ~ 23517263 (+)
G29433 NA other downstream 973367 23727012 ~ 23732471 (+)

Expression


Co-expression Network