G29288


Basic Information

Item Value
gene id G29288
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 23159951 ~ 23160396 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU38912
tctgaaatgttttgcacgatGTTTCGCTGTAtgttttgttggtcaatgtgagatgttcgagtcacacacacgtcttcgtaacagaaacaaggaaatgatattgacctgttctcactcccgcttggtcagtggctgcatgtgggactgctgggattgtcgcgagtaatgaaaatgcgatagggggccccggctgtcaatcaatatcttccAGTGATGCAGGACCCTGATTGGTCCGGGCCCGTAAGCACCgcttaccctgcttaccgatagttaagCGTCTGCGCACCCTAGcaacagcaaatgtaatttgcagccagggtcagtctagcaactctccattggcttgcgagctggaaaaacctaATTCTAGTCaggcgtgtatagagtcggtgggcgggcttaatataaggacggcagagttgcgacggttccgcgtgaattccctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU38912 True 446 lncRNA 0.50 1 23159951 23160396

Neighbor

gene id symbol gene type direction distance location
mettl15 mettl15 coding upstream 1161 23105221 ~ 23158790 (+)
mcee mcee coding upstream 145042 23012599 ~ 23014909 (+)
LOC120555841 LOC102215785,LOC102786096,LOC101482767,LOC104919260 coding upstream 199548 22945044 ~ 22960403 (+)
sult5a1 NA coding upstream 230285 22923824 ~ 22929666 (+)
slc22a31 slc22a31 coding upstream 248673 22896342 ~ 22911278 (+)
lgr4 lgr4 coding downstream 58793 23219189 ~ 23254585 (+)
slc39a13 slc39a13 coding downstream 168214 23328610 ~ 23343208 (+)
tmem276b LOC104919254,LOC101064922,LOC103364365,LOC104940771,LOC103378694 coding downstream 185091 23345487 ~ 23354201 (+)
LOC120556218 cilp coding downstream 389796 23550192 ~ 23568550 (+)
terb2 NA coding downstream 707558 23867954 ~ 23870221 (+)
G29271 NA non-coding upstream 70371 23045293 ~ 23089580 (+)
G29262 NA non-coding upstream 135197 23021429 ~ 23024754 (+)
G29228 LOC100136564,LOC104919244,LOC103365615 non-coding upstream 140573 23016032 ~ 23019378 (+)
G29243 mphosph10 non-coding upstream 151969 23004878 ~ 23007982 (+)
G29241 ist1 non-coding upstream 158902 22997702 ~ 23001049 (+)
G29294 NA non-coding downstream 197 23160593 ~ 23160917 (+)
G29323 mybpc3 non-coding downstream 126501 23286897 ~ 23294407 (+)
LOC120555420 LOC104940778 non-coding downstream 208784 23369180 ~ 23374096 (+)
G29378 NA non-coding downstream 258315 23418711 ~ 23421738 (+)
G29410 NA non-coding downstream 436056 23596452 ~ 23599696 (+)
G29292 NA other upstream 22924 23136732 ~ 23137027 (+)
LOC120555548 LOC103365626,LOC104942698 other upstream 165787 22981783 ~ 22994164 (+)
ankrd11 ankrd11 other upstream 264944 22764719 ~ 22895007 (+)
gpc5a gpc5,LOC103365231 other upstream 1287926 21720034 ~ 21872025 (+)
dcun1d2b dcun1d2,LOC102792160 other upstream 1556045 21596331 ~ 21603906 (+)
igdcc3 igdcc3 other downstream 282753 23443149 ~ 23517263 (+)
G29433 NA other downstream 566616 23727012 ~ 23732471 (+)
plekha7b NA other downstream 1075327 24235723 ~ 24314645 (+)
sox6 sox6,LOC103363464 other downstream 1159668 24320064 ~ 24455688 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 2695443 25855839 ~ 25883360 (+)

Expression


Co-expression Network