G29410


Basic Information

Item Value
gene id G29410
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 23596452 ~ 23599696 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU39052
CCGTATGTACACTTTACAATAGCATATAGCCTGACGGCTAACAAAGATgtcttaaaacatgttttaatacaTCCAAAGCACAAATAGCAATTCTTGGAAGTAAAATGGCTTAATGGatattggagagaaaaaaaaaaaaaaaaaaaaaaaaaaccattaacACGATTGCTCTTTTCTGCAGAAAAAGTGCCATGATTAAAATTTAATTCAGGACTTTCCCACAAAGCAAGCGGTATTCTCTACATGCTAAATTTAACAGTTCAGTGACATTGCGCTAAACTAAACATACAGAtatttgtaagaaaaaaaaaacactccatcTGATGTAAAGTTAAATCttcattaatacatttaaaaagtagATATGACATGCCTTTTGaaatcaaaaatacaaaagatttTCCTTACTTTaaggatttttttaaacatgaagCTGCATGTATTGTACAACACTCAGTGTACAATAAAACTGGTAATGCACATAAAAAGGAGCTAGATGAAAAGTATCAAATGCCTCCCACCGACCCTTCAGACACAAGCAATGACCGATGACTATAATCACACTGAGGGGATGAGCCCACATGGGCTACATCGCACACTCAAGATTAGGCTTGGAGATGGCAGTCAGGATGGTGAGAGCTCATAGGGGTAGGGATGGGGCTACCATGGTGGGACCTCAAGACATGTTTCCTCTTCCATGCACATTGCTCTTGCCTCCTCTCTAACATGTGAATGGTAGATACGAGCTACCATCCCTCCCTCATCGGTTTGCTTTAGTTGATGAGGAGAGAACAAAACAAGGAATTTGGAAAGACGCTTAAGACTTCACCCCCCATGTACAATTTACATTCATAGTCTGGACATGTGTACCCATAACATTATGTCTGAGCAAACACTATTGTGCCCTGTAACAAACTTGAATACAAACTAGTCCTAATTTCTGGAGAGCTACTAActttgggtaaaaaaaaaaaaaaaagaaaaaaagaggcaaagGCAGGCAGGCGCTGAACAGATGGAAACCATTTCTAATGCACAACCTGCATTAAGTGAGCAGCAGGGATTGTTTGGGCAGGGCACAGCAGGATTCACCTGGCAACTTAACTCACGGAGGGGGGGGACCGAGGTACAACTCAATGGAATCACAGTACGCAATACATACAGCACAccgaaggggaaaaaaaaaaaatattaatagaGGAAGTCTGGGTGTCTCCAGGTATCTGCAAAGATTTGAGGTCTGATTGTCTCTTTCCATCTAAGCATTTTAGGGGTAAGAGTGTAGGAAATGCTATGGGGGGATTTCTAAGGAGGGGAATCGTATGGCACTGTACAGGCAACCCAGACAAATCCAAACACTCATATTTGCTTTAACATAAAATGCACTTTGATTTAAACTGAACAAGAACTGAAAAAGGTTCAACAGTGCATGCCAAATTCAGGCAGAGATTCAAGTCAACTCTTGAGGGTTTTGGGCAATGACAGAAGACAGTCAGGCATTTGAGCTTTCTGTCTTTATCACCCAGGTTTAGGCTTGTAAGGATGCGAATAAAAACATCTACATTTCTGCCTACTGTTTGTCTCCGTTAAATAAATTAAGTTGAAAAAACAGAGGAGTAAAATGTCAGTTTGGCTTGAGTGTCCAGGCTGATGTCAGGCAGAAACACATTCAGGTAGTTACAATTCTTAAACACGTTTTAAACTGCActaaacataaaaaagaaagtatgtaagtaaaaaaaaaaaataaaaatgaaactggtagagtagcagtcagtGAAGCTGACTGTTACAACAGTATGTTGCTGGTGCCAGATATGGCTGATACAGGGTCTGGCCATAGGTTTCTACCATGGGTAGACTTTATGACACACTGGCAGAGATGTGCTACATTAGTCATAATGCTACTGCCATCACATTACAACTAAAAGAAAGAGCTCTGATTTTAGCCAGAATACTTGATTAGGAGTAAAAGACAATACTGATTATAGACAAATCAAATACTATTATTAAAGAAAGGTTAACATTGACACATATCACTTTGAAAATGAATAACCCTCAAACCTTTACAATATGTCAGATTTACAGGTAAGAAGATTTTTGATCCTAACATTTAAATAAGGAGCCATGTGTCCACAGTGACACCAACACATCGATTTAAACCTCCATTTGTTAGAACAAGAACAAACTATACTTAAAGTCCTGGAGTAATTCCATTTCGTTTGACTATGCAGTGGACTGTCATTAATATGCACCCATGttctccaataaaaaaaaataaaaaaaaggattacAATAAAATCGTACACGACCCCTTTTAAAACATATCTTACAAACAGaagtaaaacattttgaaacgctatcttttttttccttttctttttttaaacaatgaaaCACCAGTTTtaccagaaaagaaaaaagaaaaaaaagaaaactgcaaCCAACAATAGAAACTTGACTCGGCTACGGAGGAATGCATATGATTTTAAAGGCTACAGATTGTAGGTTTGCCAAACACCaaatcagtgtgtgtttgtgtgtggctaggagtaaacatacacacatgcacagattgATTTACAGGCCAGTCATTCCCGCTGAAAATGGTCTGTAGCCACAGAGCATAGTTATTCGTCAGCGCCAACAGCGTGAGCACCAGGGGTTGGTTTTGGGTTCAGGGACTCGGCCGGGCTGGAGTTCCTCTTTACCAGGTGGCTTTCCTATATCCACTAAACCAGCACCAAGACGTTCCACAGCTGGAGAGTCAGTCAAAAAGAGGAGTTTACCTGGGCTTGT
>TU39057
CCGTATGTACACTTTACAATAGCATATAGCCTGACGGCTAACAAAGATgtcttaaaacatgttttaatacaTCCAAAGCACAAATAGCAATTCTTGGAAGTAAAATGGCTTAATGGatattggagagaaaaaaaaaaaaaaaaaaaaaaaaaaccattaacACGATTGCTCTTTTCTGCAGAAAAAGTGCCATGATTAAAATTTAATTCAGGACTTTCCCACAAAGCAAGCGGTATTCTCTACATGCTAAATTTAACAGTTCAGTGACATTGCGCTAAACTAAACATACAGAtatttgtaagaaaaaaaaaacactccatcTGATGTAAAGTTAAATCttcattaatacatttaaaaagtagATATGACATGCCTTTTGaaatcaaaaatacaaaagatttTCCTTACTTTaaggatttttttaaacatgaagCTGCATGTATTGTACAACACTCAGTGTACAATAAAACTGGTAATGCACATAAAAAGGAGCTAGATGAAAAGTATCAAATGCCTCCCACCGACCCTTCAGACACAAGCAATGACCGATGACTATAATCACACTGAGGGGATGAGCCCACATGGGCTACATCGCACACTCAAGATTAGGCTTGGAGATGGCAGTCAGGATGGTGAGAGCTCATAGGGGTAGGGATGGGGCTACCATGGTGGGACCTCAAGACATGTTTCCTCTTCCATGCACATTGCTCTTGCCTCCTCTCTAACATGTGAATGGTAGATACGAGCTACCATCCCTCCCTCATCGGTTTGCTTTAGTTGATGAGGAGAGAACAAAACAAGGAATTTGGAAAGACGCTTAAGACTTCACCCCCCATGTACAATTTACATTCATAGTCTGGACATGTGTACCCATAACATTATGTCTGAGCAAACACTATTGTGCCCTGTAACAAACTTGAATACAAACTAGTCCTAATTTCTGGAGAGCTACTAActttgggtaaaaaaaaaaaaaaaagaaaaaaagaggcaaagGCAGGCAGGCGCTGAACAGATGGAAACCATTTCTAATGCACAACCTGCATTAAGTGAGCAGCAGGGATTGTTTGGGCAGGGCACAGCAGGATTCACCTGGCAACTTAACTCACGGAGGGGGGGGACCGAGGTACAACTCAATGGAATCACAGTACGCAATACATACAGCACAccgaaggggaaaaaaaaaaaatattaatagaGGAAGTCTGGGTGTCTCCAGGTATCTGCAAAGATTTGAGGTCTGATTGTCTCTTTCCATCTAAGCATTTTAGGGGTAAGAGTGTAGGAAATGCTATGGGGGGATTTCTAAGGAGGGGAATCGTATGGCACTGTACAGGCAACCCAGACAAATCCAAACACTCATATTTGCTTTAACATAAAATGCACTTTGATTTAAACTGAACAAGAACTGAAAAAGGTTCAACAGTGCATGCCAAATTCAGGCAGAGATTCAAGTCAACTCTTGAGGGTTTTGGGCAATGACAGAAGACAGTCAGGCATTTGAGCTTTCTGTCTTTATCACCCAGGTTTAGGCTTGTAAGGATGCGAATAAAAACATCTACATTTCTGCCTACTGTTTGTCTCCGTTAAATAAATTAAGTTGAAAAAACAGAGGAGTAAAATGTCAGTTTGGCTTGAGTGTCCAGGCTGATGTCAGGCAGAAACACATTCAGGTAGTTACAATTCTTAAACACGTTTTAAACTGCActaaacataaaaaagaaagtatgtaagtaaaaaaaaaaaataaaaatgaaactggtagagtagcagtcagtGAAGCTGACTGTTACAACAGTATGTTGCTGGTGCCAGATATGGCTGATACAGGGTCTGGCCATAGGTTTCTACCATGGGTAGACTTTATGACACACTGGCAGAGATGTGCTACATTAGTCATAATGCTACTGCCATCACATTACAACTAAAAGAAAGAGCTCTGATTTTAGCCAGAATACTTGATTAGGAGTAAAAGACAATACTGATTATAGACAAATCAAATACTATTATTAAAGAAAGGTTAACATTGACACATATCACTTTGAAAATGAATAACCCTCAAACCTTTACAATATGTCAGATTTACAGGTAAGAAGATTTTTGATCCTAACATTTAAATAAGGAGCCATGTGTCCACAGTGACACCAACACATCGATTTAAACCTCCATTTGTTAGAACAAGAACAAACTATACTTAAAGTCCTGGAGTAATTCCATTTCGTTTGACTATGCAGTGGACTGTCATTAATATGCACCCATGttctccaataaaaaaaaataaaaaaaaggattacAATAAAATCGTACACGACCCCTTTTAAAACATATCTTACAAACAGaagtaaaacattttgaaacgctatcttttttttccttttctttttttaaacaatgaaaCACCAGTTTtaccagaaaagaaaaaagaaaaaaaagaaaactgcaaCCAACAATAGAAACTTGACTCGGCTACGGAGGAATGCATATGATTTTAAAGGCTACAGATTGTAGGTTTGCCAAACACCaaatcagtgtgtgtttgtgtgtggctaggagtaaacatacacacatgcacagattgATTTACAGGCCAGTCATTCCCGCTGAAAATGGTCTGTAGCCACAGAGCATAGTTATTCGTCAGCGCCAACAGCGTGAGCACCAGGGGTTGGTTTTGGGTTCAGGGACTCGGCCGGGCTGGAGTTCCTCTTTACCAGGTGGCTTTCCTATATCCACTAAACCAGCACCAAGACGTTCCACAGCTGGAGAGTCAGTCAAAAAGAGGAGTTTACCTGGGCTTGTTCATAGCGTGTGTAATTTTATCTATGTATTTAGAAAATTTCATCCAgatctttaaaaatgtttttttttttttttaaagcaacggtggttttaaaaacaaaacaaaattttaaaaaaaaaggctaaaatTTTAACAGTAATGGCAATGTTGTAGTTTGTAATCCAAAGAGGGGCTTTTTACACGCATGTTCTTTTCAGTCATTTCATGTTGTCCCGTTGTGAGAGTCTGTGGTCAAGTTCAATCAGGGGGCAACAAGTCGTGAAGCCGGAACCTCTCCCGAACGTGCGGCCGCACATCCTCATTCTGACGAGTTCAGCAGGCAAGTGAACCATGAAAGGAAGAGATTAAAGatcaaattaaattacatttacaaaaatattACTTCGATGTAGCAGTCgtgaaatgtcccacaatagcTATAAGAACAGCAGGACATCTTACCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39052 False 2799 lncRNA 0.38 1 23596452 23599250
TU39057 True 3245 lncRNA 0.38 1 23596452 23599696

Neighbor

gene id symbol gene type direction distance location
LOC120556218 cilp coding upstream 27902 23550192 ~ 23568550 (+)
tmem276b LOC104919254,LOC101064922,LOC103364365,LOC104940771,LOC103378694 coding upstream 242251 23345487 ~ 23354201 (+)
slc39a13 slc39a13 coding upstream 253244 23328610 ~ 23343208 (+)
lgr4 lgr4 coding upstream 341867 23219189 ~ 23254585 (+)
mettl15 mettl15 coding upstream 437662 23105221 ~ 23158790 (+)
terb2 NA coding downstream 268258 23867954 ~ 23870221 (+)
sord sord coding downstream 271361 23871057 ~ 23875520 (+)
syt7b syt7,LOC101476086,LOC102796193,LOC100697404,LOC108250198,LOC103462425 coding downstream 371002 23970698 ~ 24071149 (+)
LOC120556108 cpsf7,LOC102795402 coding downstream 480953 24080649 ~ 24085815 (+)
dagla dagla coding downstream 493547 24093243 ~ 24125820 (+)
G29378 NA non-coding upstream 174714 23418711 ~ 23421738 (+)
LOC120555420 LOC104940778 non-coding upstream 222356 23369180 ~ 23374096 (+)
G29323 mybpc3 non-coding upstream 302045 23286897 ~ 23294407 (+)
G29294 NA non-coding upstream 435535 23160593 ~ 23160917 (+)
G29288 NA non-coding upstream 436056 23159951 ~ 23160396 (+)
G29411 NA non-coding downstream 805 23600501 ~ 23600768 (+)
G29421 NA non-coding downstream 15900 23615596 ~ 23616946 (+)
G29432 NA non-coding downstream 121501 23721197 ~ 23722650 (+)
G29438 NA non-coding downstream 143009 23742705 ~ 23743889 (+)
G29441 NA non-coding downstream 217010 23816706 ~ 23879442 (+)
igdcc3 igdcc3 other upstream 79189 23443149 ~ 23517263 (+)
G29292 NA other upstream 459425 23136732 ~ 23137027 (+)
LOC120555548 LOC103365626,LOC104942698 other upstream 602288 22981783 ~ 22994164 (+)
ankrd11 ankrd11 other upstream 701445 22764719 ~ 22895007 (+)
gpc5a gpc5,LOC103365231 other upstream 1724427 21720034 ~ 21872025 (+)
G29433 NA other downstream 127316 23727012 ~ 23732471 (+)
plekha7b NA other downstream 636027 24235723 ~ 24314645 (+)
sox6 sox6,LOC103363464 other downstream 720368 24320064 ~ 24455688 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 2256143 25855839 ~ 25883360 (+)
nfat5b nfat5 other downstream 2283758 25883454 ~ 25927726 (+)

Expression


Co-expression Network