G29432


Basic Information

Item Value
gene id G29432
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 23721197 ~ 23722650 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU39083
GGCTGCTTCATCCCTCCATCTTTGATAGGTTACCTTTCTCCTTGTCGAGTGGTGGTAGGATGCTGTTGTCTCTGCAGACTTTGAAGTAGATCTCCTGCTCCACACTTTCAGGGATGGCACCCTGTGGGATAATTATGCTGACACCTGTCTCGATGGAGCTCAGGACGCCACCATTAGAGTTGAATATACCTCGAGCAGTTGCAACCACCGTGTGgccctcatcctcatcctcatcatcatccaGGGCACTGGGGCTCACAGGGATGGCCTTGGGAACAGCGTTGATGTTGTTGTGCTGGTGTTTGGAGCGGTGGTCCATAGTGCGAGTGAAAGTATCCAGACCACTGTCATGGTCTGTGTTCATGGGCTGCGGGGGAATCTGAGGCTTCACTGGGCTGGGGCTCTGGCCCTTTGAAGCAGTCTCAGGCTTGTCATTGGGCAGAAGGTTGTGGTTGAACTTAGGACTGTCGAACATGCGCGCAAACGGCTTGGCAGACATAGTGTAGGGCTTGGGCGCGTAGCGGTTGTAGCTGGTTGCTGGTGGAGCTGCTTTTGGAGGATGTACACTAGTGCCATTAACCGGAGACTTCTCAGGGAAACTCTTGTGAGGCAGGAAGTTGGTCTGGACAGTGTCGTCTCGGCCCGGAGCTTTGGCTGTGGAAGAGCCATGAGGGTCAGCCAAAGAGCTCTACAGTATGTGTCATTGtatgcatgtttttatttgcatgAAATTATGTACATTTTGACATACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39083 True 754 lncRNA 0.52 3 23721197 23722650

Neighbor

gene id symbol gene type direction distance location
LOC120556218 cilp coding upstream 152647 23550192 ~ 23568550 (+)
tmem276b LOC104919254,LOC101064922,LOC103364365,LOC104940771,LOC103378694 coding upstream 366996 23345487 ~ 23354201 (+)
slc39a13 slc39a13 coding upstream 377989 23328610 ~ 23343208 (+)
lgr4 lgr4 coding upstream 466612 23219189 ~ 23254585 (+)
mettl15 mettl15 coding upstream 562407 23105221 ~ 23158790 (+)
terb2 NA coding downstream 145304 23867954 ~ 23870221 (+)
sord sord coding downstream 148407 23871057 ~ 23875520 (+)
syt7b syt7,LOC101476086,LOC102796193,LOC100697404,LOC108250198,LOC103462425 coding downstream 248048 23970698 ~ 24071149 (+)
LOC120556108 cpsf7,LOC102795402 coding downstream 357999 24080649 ~ 24085815 (+)
dagla dagla coding downstream 370593 24093243 ~ 24125820 (+)
G29421 NA non-coding upstream 104251 23615596 ~ 23616946 (+)
G29411 NA non-coding upstream 120429 23600501 ~ 23600768 (+)
G29410 NA non-coding upstream 121501 23596452 ~ 23599696 (+)
G29378 NA non-coding upstream 299459 23418711 ~ 23421738 (+)
LOC120555420 LOC104940778 non-coding upstream 347101 23369180 ~ 23374096 (+)
G29438 NA non-coding downstream 20055 23742705 ~ 23743889 (+)
G29441 NA non-coding downstream 94056 23816706 ~ 23879442 (+)
G29460 NA non-coding downstream 237457 23960107 ~ 23962332 (+)
G29477 NA non-coding downstream 427860 24150510 ~ 24150755 (+)
G29535 nucb2,LOC103363466,LOC101472988,LOC102310665,LOC105916282,LOC101163155,LOC107085590 non-coding downstream 504201 24226851 ~ 24227916 (+)
igdcc3 igdcc3 other upstream 203934 23443149 ~ 23517263 (+)
G29292 NA other upstream 584170 23136732 ~ 23137027 (+)
LOC120555548 LOC103365626,LOC104942698 other upstream 727033 22981783 ~ 22994164 (+)
ankrd11 ankrd11 other upstream 826190 22764719 ~ 22895007 (+)
gpc5a gpc5,LOC103365231 other upstream 1849172 21720034 ~ 21872025 (+)
G29433 NA other downstream 4362 23727012 ~ 23732471 (+)
plekha7b NA other downstream 513073 24235723 ~ 24314645 (+)
sox6 sox6,LOC103363464 other downstream 597414 24320064 ~ 24455688 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 2133189 25855839 ~ 25883360 (+)
nfat5b nfat5 other downstream 2160804 25883454 ~ 25927726 (+)

Expression


Co-expression Network