G29433


Basic Information

Item Value
gene id G29433
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 23727012 ~ 23732471 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU39086
CCTTGAATCCAGCCGGGTCAATGCGGTTCAGGGGGTCCGGCTGCACTGTGTGCTGGAAGCTAGCGTAGCCAGGGGGCTCCTGGATGACAGGCGGGTCCTCGCGGACAGGCTCAGACGAGCGGGTGATGGCAGGCTCCGTGGGTGGACCCACGTCATCATTCAGCGTTTCATCCAGCTCCTGGTCAGTATAGGCTCCACCCTCTGTGTCCGTGTCCTCGTAGTCGGAGGTGTGGCGGCTGTCAGTGCTGTACATAGAATACTCACTGCCTGGCGCCGACAGGTAGGACAGGCGGTCGTCGTGGATGTCCAGGTCATCCTCAGCTGCCCCGTCAGCtttGCCCTCTGAAACCCACACCAGCtggttctgctgctgctggattGTCTCTTTTAGTGCTCCAAACCAACCATCATTCATGTTGTTTAAGTTAATAGTCGTGGTAAAGAGGTGGTGGTTGTTCTTTCGTAATTTGAGGGCTCGTTCAAAAAGCTTCCTGGCGCTCTTTCTAGACTCAGGGCAAAGGCGGGTCCTCATGGTCTTGACGCCCTGCTTTGTGTCTGGGTTGAGAAACACCACAATTGGATACCACTGAGCGTAGTTCAGACGGTCCACTGCATTAGGGGTGATGTCCAGCACTGCGTGCTTGTCCCGGTCAATGATCTGTTTGATGGTGTGAAGGCGAATGATGCCGGTGCTTTTCTGGTCGGTTCCTGCATCCCTAGGTTCACTCTTTTCCCCTCCGTGTTGTTGCTGTGTttctgaaaagaaaatacagttACACAAACATCACTGGAGTTACGCAAATCAACATCAAGGAATGGAATGACTTTTTATGTGGGTGTATactgaatatgtgtgtgtgtggttgcacTGGCATGTGTGGTTGAGCACTTAAAGTAATTGAAATTCAATGCTGAGTAAAAACCACACACTAAAGAAGGTTGCAGTTTCATGAAGTAAGAGGCATAGGATAAGGACGGAAATTAATTAGGGTGTGCAGCTCCTCTTGGAGTGTAGGAATGAAAGATAAACAGATAAAAGGAAGAGAGAGCTTTAAATAAACAAAGGGAAATATCAGACAACTTGACTAACCTGACTAACATATACTAAAATACATTGGGAATATCTAGCAGCAGTTAAGCAGAATGCCATCTAt
>TU39087
CCTTGAATCCAGCCGGGTCAATGCGGTTCAGGGGGTCCGGCTGCACTGTGTGCTGGAAGCTAGCGTAGCCAGGGGGCTCCTGGATGACAGGCGGGTCCTCGCGGACAGGCTCAGACGAGCGGGTGATGGCAGGCTCCGTGGGTGGACCCACGTCATCATTCAGCGTTTCATCCAGCTCCTGGTCAGTATAGGCTCCACCCTCTGTGTCCGTGTCCTCGTAGTCGGAGGTGTGGCGGCTGTCAGTGCTGTACATAGAATACTCACTGCCTGGCGCCGACAGGTAGGACAGGCGGTCGTCGTGGATGTCCAGGTCATCCTCAGCTGCCCCGTCAGCtttGCCCTCTGAAACCCACACCAGCtggttctgctgctgctggattGTCTCTTTTAGTGCTCCAAACCAACCATCATTCATGTTGTTTAAGTTAATAGTCGTGGTAAAGAGGTGGTGGTTGTTCTTTCGTAATTTGAGGGCTCGTTCAAAAAGCTTCCTGGCGCTCTTTCTAGACTCAGGGCAAAGGCGGGTCCTCATGGTCTTGACGCCCTGCTTTGTGTCTGGGTTGAGAAACACCACAATTGGATACCACTGAGCGTAGTTCAGACGGTCCACTGCATTAGGGGTGATGTCCAGCACTGCGTGCTTGTCCCGGTCAATGATCTGTTTGATGGTGTGAAGGCGAATGATGCCGGTGCTTTTCTGGTCGGTTCCTGCATCCCTAGGTTCACTCTTTTCCCCTCCGTGTTGTTGCTGTGTttTTGCTAGTTCAAAAACGTCTGGCTCTTCCCTGGCCAGTTTCTCTCTGGCCACATCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39086 True 1154 TUCP 0.49 5 23727012 23731706
TU39087 False 815 lncRNA 0.55 6 23727012 23732471

Neighbor

gene id symbol gene type direction distance location
LOC120556218 cilp coding upstream 158462 23550192 ~ 23568550 (+)
tmem276b LOC104919254,LOC101064922,LOC103364365,LOC104940771,LOC103378694 coding upstream 372811 23345487 ~ 23354201 (+)
slc39a13 slc39a13 coding upstream 383804 23328610 ~ 23343208 (+)
lgr4 lgr4 coding upstream 472427 23219189 ~ 23254585 (+)
mettl15 mettl15 coding upstream 568222 23105221 ~ 23158790 (+)
terb2 NA coding downstream 135483 23867954 ~ 23870221 (+)
sord sord coding downstream 138586 23871057 ~ 23875520 (+)
syt7b syt7,LOC101476086,LOC102796193,LOC100697404,LOC108250198,LOC103462425 coding downstream 238227 23970698 ~ 24071149 (+)
LOC120556108 cpsf7,LOC102795402 coding downstream 348178 24080649 ~ 24085815 (+)
dagla dagla coding downstream 360772 24093243 ~ 24125820 (+)
G29432 NA non-coding upstream 4362 23721197 ~ 23722650 (+)
G29421 NA non-coding upstream 110066 23615596 ~ 23616946 (+)
G29411 NA non-coding upstream 126244 23600501 ~ 23600768 (+)
G29410 NA non-coding upstream 127316 23596452 ~ 23599696 (+)
G29378 NA non-coding upstream 305274 23418711 ~ 23421738 (+)
G29438 NA non-coding downstream 10234 23742705 ~ 23743889 (+)
G29441 NA non-coding downstream 84235 23816706 ~ 23879442 (+)
G29460 NA non-coding downstream 227636 23960107 ~ 23962332 (+)
G29477 NA non-coding downstream 418039 24150510 ~ 24150755 (+)
G29535 nucb2,LOC103363466,LOC101472988,LOC102310665,LOC105916282,LOC101163155,LOC107085590 non-coding downstream 494380 24226851 ~ 24227916 (+)
igdcc3 igdcc3 other upstream 209749 23443149 ~ 23517263 (+)
G29292 NA other upstream 589985 23136732 ~ 23137027 (+)
LOC120555548 LOC103365626,LOC104942698 other upstream 732848 22981783 ~ 22994164 (+)
ankrd11 ankrd11 other upstream 832005 22764719 ~ 22895007 (+)
gpc5a gpc5,LOC103365231 other upstream 1854987 21720034 ~ 21872025 (+)
plekha7b NA other downstream 503252 24235723 ~ 24314645 (+)
sox6 sox6,LOC103363464 other downstream 587593 24320064 ~ 24455688 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 2123368 25855839 ~ 25883360 (+)
nfat5b nfat5 other downstream 2150983 25883454 ~ 25927726 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 3563286 27295757 ~ 27316181 (+)

Expression


Co-expression Network