G29460


Basic Information

Item Value
gene id G29460
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 23960107 ~ 23962332 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU39118
ctgaaatattacattttaaagtgcagtgtgaTATGTGTTTTGAAGGTTAATTGTTATCACATTCATTATATATGTTACAAACTGTATGAACCATAATGGATCATCCttgggctttattgtgttatccaTGAGATGAAAATGttgctttgattttcatttaaattaaagTAAGCCCATTAGTTAAATCACAAGGACAATTCTCTCTAAAGCACTTAAGCCTCAGATTTTAGGGACAAAAGGACAGCATTGCCACTTTGTGGCTATGTCTTAACATTACATCTGAATTAAGCACCAATAGCACAATCACAGATGGACAGGGATGAAATCTGACACATTCAATTCACAAATGCCTCAGAGAACCAGACATAATCCCTTTGtaaggcgacattaaagaattAGTTCTcactcattttcaaaaaatagcAATTTATGACCTGTCAATCAAGTCATGTGTGCTAAAATGTACAGAACATAGCTTTTTCATTGCAGAAAAGTTAAAATTACTAGAACAAAAAAGGATAGCAGCCAATTGTATTAGTGATACACAGCCCATCATTTGACAACATATTGAGGGCATTATGTATGTGTCTATAATCCGCGGTTTGCTCAAAAATATGATCATTGACAATTATGTTCTAATTATCATTTAatgattttgttgttttatcaCTGTCCAATGTCAAAGAATGTTGTCACTGCTGCATTATGTTTGTTGAGTCATCATTCAGTAACTTTTTGGTCTTTTTGCCTTCTTTCAGTAGGCTAATGATGGCTGGTTCAAAAGGCAGGAGAAGCCAAAAGTGCATGGCTCAGAAGTGTATGgtaacaacaaacacaacagaaCAGTAAACAGGGTAAAATTAGGCTACGTGACCAAACAAAACGTCtattgtaaatgtgtgtttacaATATACAGTGTAAAACACTGTCTACTGTAGCTGTATTGTCAATAACTCAAACAGTATATATTTCTTTTAGTAGTTTTATTATCAGTGGTTGATGGCTTTCATACTAATATTTTCCAGGAAGTCCTGGTGGCCTGTAATCGTTGGGATCTCCTCCGCTGCGCCCATGCTCATTTGCCTTCTGATCAGCAGCAGAGTCCTCAGCACCATGACCAGTTCTTTCCTGCACCCACTCTCTGGCATTACTGTAACCTCAGCTGCCCATCTTCCCCCTGCTCCTCTGCTGGCAGCATCACTGTTTCCTCTGGCATGAAAGTATTTGTCTGAGTCTTTCCAGTTGGCCTCCCTCATATCACTGTATCCTCGCCACATATCACCAGCTCCTGAAGGCTTCACGAGGAAAGTTGTACCACTGGGCATTGGTTTCCACAATTAGAATCAGAACAATTCCTGCTAGAAGCAACTTCATGGTTACAGATgTTTAAAGTTACTTCAGAGTATAGAATAAGTCTTAAAAGATTGTGGAGTATCTTATCAGTGAGGACTCTAAAGATTTGACTCTACTTATATTCTGCTGGGATGTAGGATTTCTCAATGACGGAAATTCCCGTCCATTTGAGGGACGGTTACAGATCAGAAATGTCAGGCAAAGACACTGAGGATATTCCCTAGTTGTGCAACTGCACAGCAAAGGCCTCCTACTTCATACAATGATTGTTTCTCTTAAGATGTAGTTTCTTTTTGCTGTGAAATATTTGTGCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39118 True 1669 lncRNA 0.38 4 23960107 23962332

Neighbor

gene id symbol gene type direction distance location
sord sord coding upstream 84587 23871057 ~ 23875520 (+)
terb2 NA coding upstream 89886 23867954 ~ 23870221 (+)
LOC120556218 cilp coding upstream 391557 23550192 ~ 23568550 (+)
tmem276b LOC104919254,LOC101064922,LOC103364365,LOC104940771,LOC103378694 coding upstream 605906 23345487 ~ 23354201 (+)
slc39a13 slc39a13 coding upstream 616899 23328610 ~ 23343208 (+)
syt7b syt7,LOC101476086,LOC102796193,LOC100697404,LOC108250198,LOC103462425 coding downstream 8366 23970698 ~ 24071149 (+)
LOC120556108 cpsf7,LOC102795402 coding downstream 118317 24080649 ~ 24085815 (+)
dagla dagla coding downstream 130911 24093243 ~ 24125820 (+)
ext2 ext2 coding downstream 165128 24127460 ~ 24149905 (+)
caprin1a LOC103356992,LOC104943339 coding downstream 244379 24206711 ~ 24222446 (+)
G29441 NA non-coding upstream 80665 23816706 ~ 23879442 (+)
G29438 NA non-coding upstream 216218 23742705 ~ 23743889 (+)
G29432 NA non-coding upstream 237457 23721197 ~ 23722650 (+)
G29421 NA non-coding upstream 343161 23615596 ~ 23616946 (+)
G29411 NA non-coding upstream 359339 23600501 ~ 23600768 (+)
G29477 NA non-coding downstream 188178 24150510 ~ 24150755 (+)
G29535 nucb2,LOC103363466,LOC101472988,LOC102310665,LOC105916282,LOC101163155,LOC107085590 non-coding downstream 264519 24226851 ~ 24227916 (+)
G29579 NA non-coding downstream 640650 24602982 ~ 24605198 (+)
G29685 NA non-coding downstream 1135838 25098170 ~ 25099593 (+)
G29747 NA non-coding downstream 1258714 25221046 ~ 25221437 (+)
G29433 NA other upstream 227636 23727012 ~ 23732471 (+)
igdcc3 igdcc3 other upstream 442844 23443149 ~ 23517263 (+)
G29292 NA other upstream 823080 23136732 ~ 23137027 (+)
LOC120555548 LOC103365626,LOC104942698 other upstream 965943 22981783 ~ 22994164 (+)
ankrd11 ankrd11 other upstream 1065100 22764719 ~ 22895007 (+)
plekha7b NA other downstream 273391 24235723 ~ 24314645 (+)
sox6 sox6,LOC103363464 other downstream 357732 24320064 ~ 24455688 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 1893507 25855839 ~ 25883360 (+)
nfat5b nfat5 other downstream 1921122 25883454 ~ 25927726 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 3333425 27295757 ~ 27316181 (+)

Expression


Co-expression Network