G29535 (nucb2,LOC103363466,LOC101472988,LOC102310665,LOC105916282,LOC101163155,LOC107085590)


Basic Information

Item Value
gene id G29535
gene name nucb2,LOC103363466,LOC101472988,LOC102310665,LOC105916282,LOC101163155,LOC107085590
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 24226851 ~ 24227916 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU39240
ACCTCCTTCAGTTGATTCTGGCTACCCGGGTGGTTGACTTTAGGGTGGTCAGCATGCTTCTTCCTCATGTCCTCATAGTgctcctcctctttttttctttcgtcaTCGTCCAGTGCTTTCAGGTGTTCCCGTCTGTCGTGCTCTTTCATCATTTCATACTTCTTGAACTCCTCGTGTCTCTCTTTGTCAAAGTTCTCCAGATCTTTAGTGGCCGATTTGATGAGGCGATCCAGGTCATCCACTTCAAATGTATGTGGGTTCATG

Function

symbol description
nucb2 Predicted to enable G-protein alpha-subunit binding activity; calcium ion binding activity; and guanyl-nucleotide exchange factor activity. Predicted to be involved in small GTPase mediated signal transduction. Located in endoplasmic reticulum-Golgi intermediate compartment. Biomarker of type 2 diabetes mellitus.

NR:

description
PREDICTED: nucleobindin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39240 True 264 lncRNA 0.47 3 24226851 24227916

Neighbor

gene id symbol gene type direction distance location
caprin1a LOC103356992,LOC104943339 coding upstream 4405 24206711 ~ 24222446 (+)
ext2 ext2 coding upstream 76946 24127460 ~ 24149905 (+)
dagla dagla coding upstream 101031 24093243 ~ 24125820 (+)
LOC120556108 cpsf7,LOC102795402 coding upstream 141036 24080649 ~ 24085815 (+)
syt7b syt7,LOC101476086,LOC102796193,LOC100697404,LOC108250198,LOC103462425 coding upstream 155702 23970698 ~ 24071149 (+)
LOC120556334 LOC104919371,LOC103363468,LOC104965174,LOC102308327 coding downstream 389640 24617556 ~ 24621883 (+)
copb1 copb1 coding downstream 460110 24688026 ~ 24700170 (+)
rras2 rras2 coding downstream 474941 24702857 ~ 24737053 (+)
tub tub,LOC102789439 coding downstream 510712 24738628 ~ 24787768 (+)
ipo7 ipo7 coding downstream 956764 25184680 ~ 25200964 (+)
G29477 NA non-coding upstream 76096 24150510 ~ 24150755 (+)
G29460 NA non-coding upstream 264519 23960107 ~ 23962332 (+)
G29441 NA non-coding upstream 347409 23816706 ~ 23879442 (+)
G29438 NA non-coding upstream 482962 23742705 ~ 23743889 (+)
G29432 NA non-coding upstream 504201 23721197 ~ 23722650 (+)
G29579 NA non-coding downstream 375066 24602982 ~ 24605198 (+)
G29685 NA non-coding downstream 870254 25098170 ~ 25099593 (+)
G29747 NA non-coding downstream 993130 25221046 ~ 25221437 (+)
G29786 eif4g2,LOC102309340 non-coding downstream 1189891 25417807 ~ 25420506 (+)
G29787 NA non-coding downstream 1196993 25424909 ~ 25426358 (+)
G29433 NA other upstream 494380 23727012 ~ 23732471 (+)
igdcc3 igdcc3 other upstream 709588 23443149 ~ 23517263 (+)
G29292 NA other upstream 1089824 23136732 ~ 23137027 (+)
LOC120555548 LOC103365626,LOC104942698 other upstream 1232687 22981783 ~ 22994164 (+)
ankrd11 ankrd11 other upstream 1331844 22764719 ~ 22895007 (+)
plekha7b NA other downstream 7807 24235723 ~ 24314645 (+)
sox6 sox6,LOC103363464 other downstream 92148 24320064 ~ 24455688 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 1627923 25855839 ~ 25883360 (+)
nfat5b nfat5 other downstream 1655538 25883454 ~ 25927726 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 3067841 27295757 ~ 27316181 (+)

Expression


Co-expression Network