G29579


Basic Information

Item Value
gene id G29579
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 24602982 ~ 24605198 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU39299
GATGTACAGAGTGCTAACACACCATGTATCTGCTCTTGTGCTCACATAGGGCCGCGCCTCTTCCGTCTGCCAAATGCCTGGGCACCCACGTTGGTGGGAATGAAGTTGCTGTGTCCCAGTCCTCCTGACCGACTCAGGAAGTCAGCCAAGCGGAATAAAGCCACAACTCTGACCTGGATGGAGCTGCCTGTGTGACGTACATCTGACAAATGATCAGTGCATGGGCAAGGAGGAGAGTCCAGAGTTTGCGCATTATCATGATTCCCtgtggaaaacacacacaataccaaaTGCAAGgaaaagtttttaaaataattttgtgtGATCCGTGTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39299 True 335 lncRNA 0.49 2 24602982 24605198

Neighbor

gene id symbol gene type direction distance location
caprin1a LOC103356992,LOC104943339 coding upstream 380536 24206711 ~ 24222446 (+)
ext2 ext2 coding upstream 453077 24127460 ~ 24149905 (+)
dagla dagla coding upstream 477162 24093243 ~ 24125820 (+)
LOC120556108 cpsf7,LOC102795402 coding upstream 517167 24080649 ~ 24085815 (+)
syt7b syt7,LOC101476086,LOC102796193,LOC100697404,LOC108250198,LOC103462425 coding upstream 531833 23970698 ~ 24071149 (+)
LOC120556334 LOC104919371,LOC103363468,LOC104965174,LOC102308327 coding downstream 12358 24617556 ~ 24621883 (+)
copb1 copb1 coding downstream 82828 24688026 ~ 24700170 (+)
rras2 rras2 coding downstream 97659 24702857 ~ 24737053 (+)
tub tub,LOC102789439 coding downstream 133430 24738628 ~ 24787768 (+)
ipo7 ipo7 coding downstream 579482 25184680 ~ 25200964 (+)
G29535 nucb2,LOC103363466,LOC101472988,LOC102310665,LOC105916282,LOC101163155,LOC107085590 non-coding upstream 375066 24226851 ~ 24227916 (+)
G29477 NA non-coding upstream 452227 24150510 ~ 24150755 (+)
G29460 NA non-coding upstream 640650 23960107 ~ 23962332 (+)
G29441 NA non-coding upstream 723540 23816706 ~ 23879442 (+)
G29438 NA non-coding upstream 859093 23742705 ~ 23743889 (+)
G29685 NA non-coding downstream 492972 25098170 ~ 25099593 (+)
G29747 NA non-coding downstream 615848 25221046 ~ 25221437 (+)
G29786 eif4g2,LOC102309340 non-coding downstream 812609 25417807 ~ 25420506 (+)
G29787 NA non-coding downstream 819711 25424909 ~ 25426358 (+)
G29790 NA non-coding downstream 832452 25437650 ~ 25437859 (+)
sox6 sox6,LOC103363464 other upstream 147294 24320064 ~ 24455688 (+)
plekha7b NA other upstream 288337 24235723 ~ 24314645 (+)
G29433 NA other upstream 870511 23727012 ~ 23732471 (+)
igdcc3 igdcc3 other upstream 1085719 23443149 ~ 23517263 (+)
G29292 NA other upstream 1465955 23136732 ~ 23137027 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 1250641 25855839 ~ 25883360 (+)
nfat5b nfat5 other downstream 1278256 25883454 ~ 25927726 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 2690559 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 2713172 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 2803842 27409040 ~ 27410250 (+)

Expression


Co-expression Network