G29685


Basic Information

Item Value
gene id G29685
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 25098170 ~ 25099593 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU39426
TGTGAGAATCCCAAATATTACATaaatttatttcaaagttaAAAGGTATAACATATACAATAGTTAAGAACACTTTCATAGGTCTGTACACAGCCCAGCTATACACAAAATAAACCTATTTGCACTCAGGATAACACCACTCTGTCATACTAATGCTGCCTGATAGTCAACAAAGACCTTCATAATGGAACAGATGTTAGACCAAGCACATAGAAGTGCCAAAATAAAAGACTATTCATTAGATTTGTTTAGGCAGTTAAAGAGTGTGCCAATTTCAAGAGGATCTTCAACAGACGAGGATCAATAGCGCAACGATTACAACAGCATCAACAACAGATTGCATCGATTTCTGCAACAAGGTTTAGTGAAACTACTTTGAAATATGAAATTTAATGCAACGTTGTTATATGATGGATTTCACACCAGTTATCAGACATAGGAAGGAGTAGGTAGGAATAAAGGATTCAAATCACATTTATAAAAGATTCATTATAAAACATGCATTTTCAAGGAAGGCTGACAGATTTATATTGTACACTTGATCACGGTTTCCTTTCCCCTGTGGTGAGAGCAGTAGTTTCGAGTTATATCAGTTTTGGGGTGGAAAATACCCACCAGCACATGTTAACAGATCCTTACTGCAGCCAGGAGGCTGCCCAGTTATCCAGTTCACCAAAATCTGGATGTTTTACTCTGGAAGCCTGTTTGGCTTGTAAATGTGAAAGACAGCTTTGGAATGATGGGAATCCACCTGACACTGTGGCCAGAAAGAGTTGGAGAATGTTATAAAATATTCacttgaaatatgtttttattatttcacatTTATTAGTCTCTAACATCAAATTCATCACTGCAAATTCTCTGGTGACTTGGCACTTCTGCAAACTAGACAGCAGGCAGTTCTTCAATTCTGCATTTGTAAAAatgccatttaaaaaatgaattcaCTGTAATCTCTTGTGTCTCTTGTGTCACCTGCGGACTAAATAAGAGCTCCCAGTTTTGATTATACATTTGACAGGGACTTCTGCTCTACGGATCCAGATTTCTTCATCACGTTCACCTGTGAAGTGTAACACTTGATGAGATACAAACCACAAATGAGAGAAAGGAAGCAATATAAACTGAGGCCTCTGtcacagtgtttgttttttttgggggtttttttgtttgttttttaggaaCTCTTGCTTGCAGGGCAGTTTAACTGAGAACAACATGACGGTCGAACACAGACTTCCTCTGTTCCTGGACCTGCCTCCTCCAGCGCTGCTGGGCATGCTCCACTTTGTTCAGCATGTTGGGTCGAGAGTGTGAACGGGACAAAACATTGTGAGCATTGGCAAAAGGCTGCTGGTCCTGAAAAAACAgaatggaaaaaatatataacacgaTTAGTCTACAAGGTGTGACATACTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39426 True 1424 lncRNA 0.39 1 25098170 25099593

Neighbor

gene id symbol gene type direction distance location
tub tub,LOC102789439 coding upstream 310402 24738628 ~ 24787768 (+)
rras2 rras2 coding upstream 361117 24702857 ~ 24737053 (+)
copb1 copb1 coding upstream 398000 24688026 ~ 24700170 (+)
LOC120556334 LOC104919371,LOC103363468,LOC104965174,LOC102308327 coding upstream 476287 24617556 ~ 24621883 (+)
caprin1a LOC103356992,LOC104943339 coding upstream 875724 24206711 ~ 24222446 (+)
ipo7 ipo7 coding downstream 85087 25184680 ~ 25200964 (+)
swap70a swap70,LOC104918979 coding downstream 102432 25202025 ~ 25215060 (+)
ampd3a LOC104930104 coding downstream 226653 25326246 ~ 25355853 (+)
adma NA coding downstream 233391 25332984 ~ 25335479 (+)
ctr9 ctr9 coding downstream 308008 25407601 ~ 25416786 (+)
G29579 NA non-coding upstream 492972 24602982 ~ 24605198 (+)
G29535 nucb2,LOC103363466,LOC101472988,LOC102310665,LOC105916282,LOC101163155,LOC107085590 non-coding upstream 870254 24226851 ~ 24227916 (+)
G29477 NA non-coding upstream 947415 24150510 ~ 24150755 (+)
G29460 NA non-coding upstream 1135838 23960107 ~ 23962332 (+)
G29441 NA non-coding upstream 1218728 23816706 ~ 23879442 (+)
G29747 NA non-coding downstream 121453 25221046 ~ 25221437 (+)
G29786 eif4g2,LOC102309340 non-coding downstream 318214 25417807 ~ 25420506 (+)
G29787 NA non-coding downstream 325316 25424909 ~ 25426358 (+)
G29790 NA non-coding downstream 338057 25437650 ~ 25437859 (+)
LOC120555818 NA non-coding downstream 342708 25442301 ~ 25446052 (+)
sox6 sox6,LOC103363464 other upstream 642482 24320064 ~ 24455688 (+)
plekha7b NA other upstream 783525 24235723 ~ 24314645 (+)
G29433 NA other upstream 1365699 23727012 ~ 23732471 (+)
igdcc3 igdcc3 other upstream 1580907 23443149 ~ 23517263 (+)
G29292 NA other upstream 1961143 23136732 ~ 23137027 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other downstream 756246 25855839 ~ 25883360 (+)
nfat5b nfat5 other downstream 783861 25883454 ~ 25927726 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 2196164 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 2218777 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 2309447 27409040 ~ 27410250 (+)

Expression


Co-expression Network