G29964


Basic Information

Item Value
gene id G29964
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 26005263 ~ 26006950 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU39815
TTTGCTTAgtgtttttacatttatctTATATGGTGTATCTGTGCTCTGAATGACTCTGAATGGTGACTAATTCACTTAGCCTAAAGCCATTTAATGCATTGGAAGAATAATATGTAGTCCTTACAGCTACTTTACTTTGATTTGTCATCTAGAGCTTCACCAGCCCTCACCAGATACAGACTATTGGCTTCTCATGAATGCACCTAAAGACAGCCATAGTTCTGTTGTTGGCTGCTCTCTGAACTCCTTTGAAGATCACAACAACTGAGGATTCTTCTGTCACTGTGGATCACAGGATGAGGCAGATTGATTTAGCAGGTTGAGATATGGAGCCATACTCGGTATCTTGAATGCAAATGATGCTGGAGGACTTTCTTAGTCTCCCGACTGAAGTTATACGTGGCCTTATAGGTCTCTTGGTTTACAAAAgatttacaaaacaaaaaacatgaccAAAAAGTTGCCATTCTTAAATGGTAATGTGATTAccataataaaaaaactaaagcaTATATCTATGACACCAGCTTTGTGCTTTCCCACAAACCTTTAGTGGCTACCTATTCTGACTAAATAAGGCAGGAGGTGCAGATATCAGCCAATATTACTGTTCCTTAAGGGCAAACCAGCTCACATGTTAATATCTTAAAGGCATCAGCACTTCTTTTCCCTTATTACCTGTAACACCTTATTGCTACTTTGCCTCAGGTTATGAGCTGCACCAGCTCAATTGGTTCATTACCCTGTACTCTTAACATTTTTATGAGATGGGATTTAACAATTGACCTCAGAATATACACAATGTTTTTCCTTTATCTAagtatttgttttaattgttttcattagttttGGTTATCAAATAAGTAATTCAAAAAAGCCAAAATACGTGTTTTCTTGGTTTAAACATTGATACAATGAGccatgcatactgtatgtgtcatgCTCTTCTGGGGTTACCTGAATTACGAAATTTTTTAGATGTTTAATGGTAATACATGTTAAACAGTGATGCATGGGTCTTTAATGCCTCAGCAGATTTGCCCCAAAcatcttttttaattctttatcTTTTTCATTCAGTGACAAGTTTCATTGCAATTAATCATGTATGAAGTATTACAGTAATATCATTGTGTGCCTGTAGCTAGCTGAATCCTACCTACATTCATGTTTTAATGAGAAACCATCATTTGTGCCACAGTGGTGCAACAACAGTGAGCTGAATCACTGGAGACAATAGTTCTTGTGGCCATCTTGAACTgcggataaaaaaataaaaaaataaataaactgggaAGAATTTACTGCTTATTTCCCCTTATCTATACTGGCACCATTGTCTGACAAAATTAACAAGTCATAGGTTTTACACCACACGGATTAAACTGAAATTTGTCATagacaatctctctctctttcacccaTCCACTGCTAATCAGGACAAGGTTTACAGCCCATAACCCTAATATGCAACTGCTGTAACTGCAGGCTGTGTCGGTGAGAAGCAACCCATGCATCATTAGTGAAATAattgatttattaaaaaggAAGAAAGGGATTTATTGCATGCttacttttattattaagcTGTGCTGTGCAGTCATTCCTTTGGGTCTTATGATATGCTAATATGCAAGGCTGCATTTGCACAAATCTCTGTTCTTGTAGTTTAGGCTCTCTGTCTTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39815 True 1688 lncRNA 0.37 1 26005263 26006950

Neighbor

gene id symbol gene type direction distance location
cpne7 cpne7 coding upstream 1628 25971933 ~ 26003635 (+)
rpl13 rpl13 coding upstream 38625 25960918 ~ 25966638 (+)
LOC120556588 NA coding upstream 39008 25966177 ~ 25966255 (+)
LOC120556589 NA coding upstream 40505 25964679 ~ 25964758 (+)
gcshb gcsh coding upstream 47456 25953798 ~ 25957807 (+)
zgc:162592 LOC104919466,LOC102228142,LOC104964798,LOC103150715,LOC108251387,LOC106918128 coding downstream 43913 26050863 ~ 26054674 (+)
dhx38 dhx38 coding downstream 58917 26065867 ~ 26081611 (+)
hnf4b NA coding downstream 607872 26614822 ~ 26624049 (+)
marveld3 marveld3,LOC103375894 coding downstream 692889 26699839 ~ 26702356 (+)
LOC120555610 znf821 coding downstream 772684 26779634 ~ 26797591 (+)
G29922 NA non-coding upstream 75290 25929747 ~ 25929973 (+)
G29915 NA non-coding upstream 142872 25861728 ~ 25862391 (+)
G29868 NA non-coding upstream 317155 25685840 ~ 25688108 (+)
G29851 NA non-coding upstream 368138 25624948 ~ 25637125 (+)
G29849 NA non-coding upstream 382811 25622189 ~ 25622452 (+)
G29974 NA non-coding downstream 50978 26057928 ~ 26059434 (+)
G29975 LOC103361962,LOC107659108,LOC101069992,LOC107565377 non-coding downstream 54241 26061191 ~ 26063421 (+)
G30003 NA non-coding downstream 111215 26118165 ~ 26118521 (+)
G30006 NA non-coding downstream 157626 26164576 ~ 26164930 (+)
G30007 NA non-coding downstream 166251 26173201 ~ 26173742 (+)
nfat5b nfat5 other upstream 77537 25883454 ~ 25927726 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other upstream 121903 25855839 ~ 25883360 (+)
sox6 sox6,LOC103363464 other upstream 1549575 24320064 ~ 24455688 (+)
plekha7b NA other upstream 1690618 24235723 ~ 24314645 (+)
G29433 NA other upstream 2272792 23727012 ~ 23732471 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 1288807 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 1311420 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 1402090 27409040 ~ 27410250 (+)
vrk3 NA other downstream 1419338 27426288 ~ 27440414 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other downstream 1449466 27456416 ~ 27464759 (+)

Expression


Co-expression Network