G29975 (LOC103361962,LOC107659108,LOC101069992,LOC107565377)


Basic Information

Item Value
gene id G29975
gene name LOC103361962,LOC107659108,LOC101069992,LOC107565377
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 26061191 ~ 26063421 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU39830
GCACagtcatgctttttttttgtcccccAGGACTGTGTTTTCTTCCAGGTAGACTACTGACAAGATCTTTAATTGCAGCATGAGTTTTGCTCAGTTTAGTTAGATGGCCATCCCTCAATATTTCCACATTATTTCTTAATCATGAATGTGTGGAGTGGAAGCTGAGACTGAGTGGGTCATAGAAGAgacatttaaagaaagaaaaattaaCGTTATGCCCATCTTGTGACTCCAAGCAACTTTTGTGCAAGAAATTTGCATCAAGGTTTTTTCTCAAAGGAGATCTGATGACGCCGATTGATTACTCAGCTTGGTTAGAATTAAGCAATGATAATGATTTAATAGCAGTTAAACTTCAGTATTTGACAGAGGGATGTTGATATCATGTGAAGATACTACAGACAGGGAATCATATCTTTCAGAGCTAACATCTTACCATGTGAAGCTCCCCAACGCAGTACTGCTGGAGCATCTCCCTGGCATCTGTGGAATGACCCACATCCTCAAAACTCTCTGTTGCGTCTGCACCTGCCTGCTCCAGCAAAACTTCCTCGCCTCCCGGATGCTCTTCAAGGAAACCTGTAATGTCGTACACTTTATCGTGGATGATGAGCCATGTgtcagtgctcacattatgcgATCTTACTTCTTCTAATGTGTAATATTTTACACCACATTCTACGGTTTCGCCGTTTCCCTCAACATTGGTGTAATTAGCGGGTCCACTGCCTGTGTTAATGGGGTTGTCGATAGTTTCCTCACCCATTCTAACGTTCATACAAAAACCTAACTATGTCGATAGAgcagcaagctaacgttagcttctgtTATCCAGGTAACTTATggatgtaacgttaacgttagctagctacgtgTACGATCAGTTTTCTCACTGTTTGAATAaggttagtttaaaaaaaaaagctccaatTAGCTACACCGCCGAGGTAAAAAGACATAAACACCTGTATTAGCACACATACGGTATGCTAAAACACGTTAcgaaatagaagaaaaaaaaacaccctaaCCCA

Function

NR:

description
PREDICTED: cytochrome b5-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU39830 True 1034 lncRNA 0.41 2 26061191 26063421

Neighbor

gene id symbol gene type direction distance location
zgc:162592 LOC104919466,LOC102228142,LOC104964798,LOC103150715,LOC108251387,LOC106918128 coding upstream 6517 26050863 ~ 26054674 (+)
cpne7 cpne7 coding upstream 57556 25971933 ~ 26003635 (+)
rpl13 rpl13 coding upstream 94553 25960918 ~ 25966638 (+)
dhx38 dhx38 coding downstream 2446 26065867 ~ 26081611 (+)
hnf4b NA coding downstream 551401 26614822 ~ 26624049 (+)
marveld3 marveld3,LOC103375894 coding downstream 636418 26699839 ~ 26702356 (+)
LOC120555610 znf821 coding downstream 716213 26779634 ~ 26797591 (+)
myo1ea myo1e,LOC103362848 coding downstream 777700 26841121 ~ 26891262 (+)
G29974 NA non-coding upstream 1757 26057928 ~ 26059434 (+)
G29964 NA non-coding upstream 54241 26005263 ~ 26006950 (+)
G29922 NA non-coding upstream 131218 25929747 ~ 25929973 (+)
G29915 NA non-coding upstream 198800 25861728 ~ 25862391 (+)
G29868 NA non-coding upstream 373083 25685840 ~ 25688108 (+)
G30003 NA non-coding downstream 54744 26118165 ~ 26118521 (+)
G30006 NA non-coding downstream 101155 26164576 ~ 26164930 (+)
G30007 NA non-coding downstream 109780 26173201 ~ 26173742 (+)
G30020 NA non-coding downstream 162144 26225565 ~ 26225802 (+)
G30022 NA non-coding downstream 165009 26228430 ~ 26228663 (+)
nfat5b nfat5 other upstream 133465 25883454 ~ 25927726 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other upstream 177831 25855839 ~ 25883360 (+)
sox6 sox6,LOC103363464 other upstream 1605503 24320064 ~ 24455688 (+)
plekha7b NA other upstream 1746546 24235723 ~ 24314645 (+)
G29433 NA other upstream 2328720 23727012 ~ 23732471 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 1232336 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 1254949 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 1345619 27409040 ~ 27410250 (+)
vrk3 NA other downstream 1362867 27426288 ~ 27440414 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other downstream 1392995 27456416 ~ 27464759 (+)

Expression


Co-expression Network