G30124



Basic Information


Item Value
gene id G30124
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 26891684 ~ 26892565 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU40000
TTGTATCAGGCAAAATCATGACAGAATACATTTTATCTAACTTTATGTGACACTTTGCACTAAGATGATAgttgctgcgttcatgccacctcggaataaccgGCACCGCCCCccggttacgttgtttttccgactggcagcgttcacatggtcgggatgcgtgttcttcttcttctgttatattggcgtttggcataacaactttttgcatgactgccaccaacggttggccgtagccgagagcatcaggtgtgtgaaaacatggaggccacaataacaaaagatttgctgctgttttcttatacgagcatccaaacagcacatcgccaagtgtttgtttgtgttatctggaggacaacgaacgggaaaagacacggataatgtgttgttgttttttatacataggcctatttatgaataattttaaacatattatgtctgtgtatgtttcttggcagaggcatttgtccacaataaacagtttattgtcattaaaatatgttcagtgaaccaaagtcgcctccatcaaacgtcagttgtcaacaacgcgtcaccaactgggaaactcggttatcaaaatccagccagtttcccacctctgattcccacaggacgttacgtgaatggtgacgttttcactcggaaaaacgtttttccgatgtccatgaacgcacggaaaGGCTTTTTTGTTCTCCAGTGAACACAAGCAGACCTTTTTCATGGACGCATTTTGACATGCCACGgcagaaaagcacaggtgtaaataatcaaATGAACTGACGCCTGTCTCACTGTCATGAGCCATCATTAAttttagtaacacctgtgctttaccTGATATGACAAGTCAGACTCTGTTGTAAAAAGgtacaatagaccttt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU40000 True 882 lncRNA 0.42 1 26891684 26892565

Neighbor


gene id symbol gene type direction distance location
myo1ea myo1e,LOC103362848 coding upstream 422 26841121 ~ 26891262 (+)
LOC120555610 znf821 coding upstream 94093 26779634 ~ 26797591 (+)
marveld3 marveld3,LOC103375894 coding upstream 189328 26699839 ~ 26702356 (+)
hnf4b NA coding upstream 267635 26614822 ~ 26624049 (+)
dhx38 dhx38 coding upstream 810073 26065867 ~ 26081611 (+)
sltm sltm coding downstream 38263 26930828 ~ 26944594 (+)
adam10a adam10 coding downstream 76801 26969366 ~ 27001436 (+)
aldh1a2 aldh1a2 coding downstream 146940 27039505 ~ 27065888 (+)
LOC120556070 NA coding downstream 360116 27252681 ~ 27260955 (+)
znf280d znf280d coding downstream 368990 27261555 ~ 27279401 (+)
G30023 NA non-coding upstream 662692 26228729 ~ 26228992 (+)
G30022 NA non-coding upstream 663021 26228430 ~ 26228663 (+)
G30020 NA non-coding upstream 665882 26225565 ~ 26225802 (+)
G30007 NA non-coding upstream 717942 26173201 ~ 26173742 (+)
G30006 NA non-coding upstream 726754 26164576 ~ 26164930 (+)
G30148 aqp9 non-coding downstream 124393 27016958 ~ 27029554 (+)
G30235 cgnl1 non-coding downstream 237611 27130176 ~ 27131908 (+)
G30280 NA non-coding downstream 406264 27298829 ~ 27299567 (+)
G30287 ctcf,LOC103374180,LOC104965832,LOC102192328 non-coding downstream 558773 27451338 ~ 27455971 (+)
G30364 NA non-coding downstream 594239 27486804 ~ 27487597 (+)
nfat5b nfat5 other upstream 963958 25883454 ~ 25927726 (+)
pkd1l2a vat1l,pkd1l2,LOC102776808 other upstream 1008324 25855839 ~ 25883360 (+)
sox6 sox6,LOC103363464 other upstream 2435996 24320064 ~ 24455688 (+)
plekha7b NA other upstream 2577039 24235723 ~ 24314645 (+)
G29433 NA other upstream 3159213 23727012 ~ 23732471 (+)
LOC120556198 LOC103371916,LOC104965843 other downstream 403192 27295757 ~ 27316181 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other downstream 425805 27318370 ~ 27351837 (+)
LOC120555577 NA other downstream 516475 27409040 ~ 27410250 (+)
vrk3 NA other downstream 533723 27426288 ~ 27440414 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other downstream 563851 27456416 ~ 27464759 (+)

Expression



Co-expression Network