G30295


Basic Information

Item Value
gene id G30295
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 27465778 ~ 27467021 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU40247
aaatgcacctgctctgtgatagtctcagaggtccgtgtaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtggagaagtttatagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactacaaatctacgaagacccggccgtccctctaaactttcagctcatacaatgagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggcgggagactctgtccataggacaacaatcagtcgtatactgcacaaatatggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccaaaagccacctgggagacacaccaaacgtggaagaaggtgctgtggtcagatgaaaccaaaatcaaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcacaaataaacatatccaggagttagaatggccaagtcaaagtccagacctgaatcccatcgagaatctgtggaaagaactgaaaactgctgttcacaaacgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggcaaaaatgtcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatatttcagttttttatttgtttaaaaggtttgaaatatccaataaatttcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaattacagttttatatcttaatgtttgaggcctgaaatgtgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40247 True 1244 TUCP 0.43 1 27465778 27467021

Neighbor

gene id symbol gene type direction distance location
rab27a rab27a coding upstream 40076 27410828 ~ 27425702 (+)
ccpg1 NA coding upstream 62464 27391122 ~ 27403314 (+)
prtga prtg,LOC102785529 coding upstream 76411 27356268 ~ 27389367 (+)
mns1 mns1,LOC102786898 coding upstream 178222 27281412 ~ 27287556 (+)
znf280d znf280d coding upstream 186377 27261555 ~ 27279401 (+)
nudt21 nudt21 coding downstream 844 27467865 ~ 27472009 (+)
tradd tradd coding downstream 22992 27490013 ~ 27499955 (+)
gnao1b gnao1,LOC103374184,LOC101483250 coding downstream 34145 27501166 ~ 27509230 (+)
thap11 thap11 coding downstream 81433 27548454 ~ 27552229 (+)
nrn1lb nrn1l,LOC101167108,LOC107381583,LOC103366277 coding downstream 88172 27555193 ~ 27560381 (+)
G30287 ctcf,LOC103374180,LOC104965832,LOC102192328 non-coding upstream 9807 27451338 ~ 27455971 (+)
G30280 NA non-coding upstream 166211 27298829 ~ 27299567 (+)
G30235 cgnl1 non-coding upstream 333870 27130176 ~ 27131908 (+)
G30148 aqp9 non-coding upstream 436224 27016958 ~ 27029554 (+)
G30124 NA non-coding upstream 573213 26891684 ~ 26892565 (+)
G30364 NA non-coding downstream 19783 27486804 ~ 27487597 (+)
G30423 NA non-coding downstream 169838 27636859 ~ 27637082 (+)
G30428 NA non-coding downstream 196179 27663200 ~ 27663466 (+)
G30461 NA non-coding downstream 344107 27811128 ~ 27811547 (+)
G30518 NA non-coding downstream 430656 27897677 ~ 27898381 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other upstream 1019 27456416 ~ 27464759 (+)
vrk3 NA other upstream 25364 27426288 ~ 27440414 (+)
LOC120555577 NA other upstream 55528 27409040 ~ 27410250 (+)
nedd4a nedd4,LOC103371920,LOC102785817 other upstream 113941 27318370 ~ 27351837 (+)
LOC120556198 LOC103371916,LOC104965843 other upstream 149597 27295757 ~ 27316181 (+)
ogfod1 ogfod1,LOC102779874 other downstream 6644 27473665 ~ 27486769 (+)
G30366 NA other downstream 20656 27487677 ~ 27488791 (+)
LOC120555373 LOC102214634,LOC101478275,LOC102310185,LOC103366289 other downstream 333447 27800468 ~ 27807464 (+)
LOC120555397 LOC100695720,LOC100703698,LOC102797576,LOC101469320,LOC102211850,LOC101061652 other downstream 493899 27960920 ~ 27963055 (+)
mvda mvd other downstream 502877 27969898 ~ 27975301 (+)

Expression


Co-expression Network