G30364


Basic Information

Item Value
gene id G30364
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 27486804 ~ 27487597 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU40337
TgacatctttctttcttcttcttaaggtttttttttcttaaggcAACTGCCCTGTTCCTTGGGAGCTATTTGGGATTCATTGTTTTGCTCAAGAACTATTTGAGGTGTCTTTTTGACAGAATGAGCTGGGGATTGAACTGCCAAGCCTTTTGATTACTGGACCAGCACCAGTTCCTGGAAAACAGAAACTGTTTCATTTAGTTAAGTTTTAATAGATATTGTTCAGGCATACCCATTTGCAAATTATCAGTCTCCTAAAAGTCTGCTAGCTACTTTTAGTGCATCTTCATTTcatgaaaattacattttgaagaTTTTGGTTGAATTTGCACTGCTGCTGTTATTGCAGTTAACTTCAACCAAGTGTGTGAAAACCATAAGTGAGCATAGATGGGATGACACAGCTCAGTCCCAGCTCTTGTCTTAAACTAAATCATTAAACATTACAGTTTATCTGCTATTACCTTGGTCAGTGCTAAAATTGGTTCACTTCAGTAACTATGGGTACAAATCTTTAGAGTGTGGATCCTTTTTAATTGTAATATCGTTGGGTATGAGCTGGAAAATGATTTTTATGTGACAGAATGATGCTTTTGACACAGTGGTGAAACCAGTATCATAATCAAacaggtacagtacaggccaaaagtttggacacaccttctcattcaatgagtttcctttattttcatgactatttacattgtagattctcactgaaggcatcaaaactgtgaatgaacacatatggaattatgtacttaacaaaaaagtgtgaaataactgaaaacatg

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
TU40337 True 794 lncRNA 0.36 1 27486804 27487597

Neighbor

gene id symbol gene type direction distance location
nudt21 nudt21 coding upstream 14795 27467865 ~ 27472009 (+)
rab27a rab27a coding upstream 61102 27410828 ~ 27425702 (+)
ccpg1 NA coding upstream 83490 27391122 ~ 27403314 (+)
prtga prtg,LOC102785529 coding upstream 97437 27356268 ~ 27389367 (+)
mns1 mns1,LOC102786898 coding upstream 199248 27281412 ~ 27287556 (+)
tradd tradd coding downstream 2416 27490013 ~ 27499955 (+)
gnao1b gnao1,LOC103374184,LOC101483250 coding downstream 13569 27501166 ~ 27509230 (+)
thap11 thap11 coding downstream 60857 27548454 ~ 27552229 (+)
nrn1lb nrn1l,LOC101167108,LOC107381583,LOC103366277 coding downstream 67596 27555193 ~ 27560381 (+)
slc38a8b LOC104927248,LOC103366290 coding downstream 75807 27563404 ~ 27570646 (+)
G30287 ctcf,LOC103374180,LOC104965832,LOC102192328 non-coding upstream 30833 27451338 ~ 27455971 (+)
G30280 NA non-coding upstream 187237 27298829 ~ 27299567 (+)
G30235 cgnl1 non-coding upstream 354896 27130176 ~ 27131908 (+)
G30148 aqp9 non-coding upstream 457250 27016958 ~ 27029554 (+)
G30124 NA non-coding upstream 594239 26891684 ~ 26892565 (+)
G30423 NA non-coding downstream 149262 27636859 ~ 27637082 (+)
G30428 NA non-coding downstream 175603 27663200 ~ 27663466 (+)
G30461 NA non-coding downstream 323531 27811128 ~ 27811547 (+)
G30518 NA non-coding downstream 410080 27897677 ~ 27898381 (+)
LOC120555388 NA non-coding downstream 610136 28097733 ~ 28108311 (+)
ogfod1 ogfod1,LOC102779874 other upstream 35 27473665 ~ 27486769 (+)
G30295 NA other upstream 19783 27465778 ~ 27467021 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other upstream 22045 27456416 ~ 27464759 (+)
vrk3 NA other upstream 46390 27426288 ~ 27440414 (+)
LOC120555577 NA other upstream 76554 27409040 ~ 27410250 (+)
G30366 NA other downstream 80 27487677 ~ 27488791 (+)
LOC120555373 LOC102214634,LOC101478275,LOC102310185,LOC103366289 other downstream 312871 27800468 ~ 27807464 (+)
LOC120555397 LOC100695720,LOC100703698,LOC102797576,LOC101469320,LOC102211850,LOC101061652 other downstream 473323 27960920 ~ 27963055 (+)
mvda mvd other downstream 482301 27969898 ~ 27975301 (+)
G30631 NA other downstream 929760 28417357 ~ 28417812 (+)

Expression


Co-expression Network