G30428


Basic Information

Item Value
gene id G30428
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 27663200 ~ 27663466 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU40454
catcatcaaacttTTATTACAGACTCAAGGTCCAAATCACCCACAAcagtacataaatacatatccataaaacacatgcatacacacctacctatgtaataaatataaaaaacaatttttcTACCAGGAGACAATTATACCAGTGTTTCCACATACGGGATTGGTAGCGTGTAGTGCTTAGACGTATGTCAGTTAAGcccattattatttcattttgtgacCCATTAAGCCGACACATAAATTTAAGCATTAGGTTTCTTAAAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40454 True 267 lncRNA 0.34 1 27663200 27663466

Neighbor

gene id symbol gene type direction distance location
LOC120555868 NA coding upstream 1364 27655499 ~ 27661836 (+)
slc38a7 slc38a7 coding upstream 13863 27638344 ~ 27649337 (+)
LOC120556085 got2 coding upstream 27093 27626984 ~ 27636107 (+)
LOC120556424 LOC103366279,LOC100707167 coding upstream 43305 27605797 ~ 27619895 (+)
cmtr2 cmtr2 coding upstream 77757 27578102 ~ 27585443 (+)
gas8 NA coding downstream 536 27664002 ~ 27668639 (+)
LOC120556493 strc,LOC103366292,LOC102778251 coding downstream 7055 27670521 ~ 27671873 (+)
LOC120555864 strc coding downstream 8072 27671538 ~ 27687620 (+)
furina LOC104927319,LOC103366286 coding downstream 26620 27690086 ~ 27771828 (+)
fes LOC100704775 coding downstream 111188 27774654 ~ 27789710 (+)
G30423 NA non-coding upstream 26118 27636859 ~ 27637082 (+)
G30364 NA non-coding upstream 175603 27486804 ~ 27487597 (+)
G30287 ctcf,LOC103374180,LOC104965832,LOC102192328 non-coding upstream 207229 27451338 ~ 27455971 (+)
G30280 NA non-coding upstream 363633 27298829 ~ 27299567 (+)
G30235 cgnl1 non-coding upstream 531292 27130176 ~ 27131908 (+)
G30461 NA non-coding downstream 147662 27811128 ~ 27811547 (+)
G30518 NA non-coding downstream 234211 27897677 ~ 27898381 (+)
LOC120555388 NA non-coding downstream 434267 28097733 ~ 28108311 (+)
G30615 NA non-coding downstream 561718 28225184 ~ 28225447 (+)
G30686 NA non-coding downstream 912069 28575535 ~ 28576063 (+)
G30366 NA other upstream 174409 27487677 ~ 27488791 (+)
ogfod1 ogfod1,LOC102779874 other upstream 176431 27473665 ~ 27486769 (+)
G30295 NA other upstream 196179 27465778 ~ 27467021 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other upstream 198441 27456416 ~ 27464759 (+)
vrk3 NA other upstream 222786 27426288 ~ 27440414 (+)
LOC120555373 LOC102214634,LOC101478275,LOC102310185,LOC103366289 other downstream 137002 27800468 ~ 27807464 (+)
LOC120555397 LOC100695720,LOC100703698,LOC102797576,LOC101469320,LOC102211850,LOC101061652 other downstream 297454 27960920 ~ 27963055 (+)
mvda mvd other downstream 306432 27969898 ~ 27975301 (+)
G30631 NA other downstream 753891 28417357 ~ 28417812 (+)
cmc2 cmc2,LOC102791261 other downstream 807406 28470872 ~ 28477283 (+)

Expression


Co-expression Network