G30461


Basic Information

Item Value
gene id G30461
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 27811128 ~ 27811547 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU40496
cactagcaacgttaactgtatagatagacgattaatctaatgctaatttagccagctagaacaccccggtctgtctgcctcactcccccggcgcagagagactcagtcggggatgacagctgacaacagccccgggacatatagctagctagctatcgttagcccccagtcagctatcagccagctacttttattacagcaaccccccggccagaacttatctccagtgcctggtgcttacgacgctaacggcagtttaattaaacgtcgggaaacggaccatatccgatcagaccaggcaccgagtcacaacagcggccatccatagagttagctacatctccgcagcgctaccggtgtatgcATAGACATAATGGGTGTATGtgctgaaaatctcctccctgccgaatttctcccctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU40496 True 420 lncRNA 0.52 1 27811128 27811547

Neighbor

gene id symbol gene type direction distance location
fes LOC100704775 coding upstream 21418 27774654 ~ 27789710 (+)
furina LOC104927319,LOC103366286 coding upstream 39300 27690086 ~ 27771828 (+)
LOC120555864 strc coding upstream 123508 27671538 ~ 27687620 (+)
LOC120556493 strc,LOC103366292,LOC102778251 coding upstream 139255 27670521 ~ 27671873 (+)
gas8 NA coding upstream 142489 27664002 ~ 27668639 (+)
LOC120555476 LOC103372227 coding downstream 65539 27877086 ~ 27892393 (+)
LOC120555396 LOC102077336,LOC102797876,LOC101469017,LOC102307906,LOC103372225,LOC107381323 coding downstream 106452 27917999 ~ 27958739 (+)
pdcd5 pdcd5 coding downstream 151940 27963487 ~ 27968968 (+)
LOC120555400 LOC104927415,LOC102306658,LOC101470167,LOC102796688,LOC102219145,LOC107381322,LOC105015958 coding downstream 164745 27976292 ~ 27978845 (+)
tcf25 tcf25,LOC102796393 coding downstream 168747 27980294 ~ 27996866 (+)
G30428 NA non-coding upstream 147662 27663200 ~ 27663466 (+)
G30423 NA non-coding upstream 174046 27636859 ~ 27637082 (+)
G30364 NA non-coding upstream 323531 27486804 ~ 27487597 (+)
G30287 ctcf,LOC103374180,LOC104965832,LOC102192328 non-coding upstream 355157 27451338 ~ 27455971 (+)
G30280 NA non-coding upstream 511561 27298829 ~ 27299567 (+)
G30518 NA non-coding downstream 86130 27897677 ~ 27898381 (+)
LOC120555388 NA non-coding downstream 286186 28097733 ~ 28108311 (+)
G30615 NA non-coding downstream 413637 28225184 ~ 28225447 (+)
G30686 NA non-coding downstream 763988 28575535 ~ 28576063 (+)
G30687 NA non-coding downstream 788058 28599605 ~ 28599848 (+)
LOC120555373 LOC102214634,LOC101478275,LOC102310185,LOC103366289 other upstream 3664 27800468 ~ 27807464 (+)
G30366 NA other upstream 322337 27487677 ~ 27488791 (+)
ogfod1 ogfod1,LOC102779874 other upstream 324359 27473665 ~ 27486769 (+)
G30295 NA other upstream 344107 27465778 ~ 27467021 (+)
LOC120555924 LOC103398348,LOC104965831,LOC103374185 other upstream 346369 27456416 ~ 27464759 (+)
LOC120555397 LOC100695720,LOC100703698,LOC102797576,LOC101469320,LOC102211850,LOC101061652 other downstream 149373 27960920 ~ 27963055 (+)
mvda mvd other downstream 158351 27969898 ~ 27975301 (+)
G30631 NA other downstream 605810 28417357 ~ 28417812 (+)
cmc2 cmc2,LOC102791261 other downstream 659325 28470872 ~ 28477283 (+)
G30695 NA other downstream 948647 28760194 ~ 28762752 (+)

Expression


Co-expression Network