G30634


Basic Information

Item Value
gene id G30634
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 28225093 ~ 28225447 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU40708
atgttgGACATGAGAATGAACCCAGTGGAGGGCTTTGCATCCAAGTGGGACTACGAAAACAAGCAATGGAAAAAGTAAAGGACCCAGAGGACCAAAACCCAAACTTGAAGATAAAGGCAGACCAACTCAAAGATACAAGAATACctatatttctgtatttatcaATTGTCCACATTACCTCAGTCTGTGCATTTTGGAAGACCTCTTCCTCTTAAGGTCATCATGTAATAtagaagtaaaaaataaaaatgattaaacTGATAAAACCTATCAGTATTTTGGTTAGTGAGTGACTTCTGTGTAAATCATGTTTTCACACAAAATGACTTGTTTCATATATAAAAAATGAAGTAAT

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU40708 True 355 lncRNA 0.34 1 28225093 28225447

Neighbor

gene id symbol gene type direction distance location
dusp22a LOC104927513,LOC103374648 coding downstream 887 28205726 ~ 28224206 (-)
irf8 irf8 coding downstream 21215 28199110 ~ 28203878 (-)
foxf1 foxf1 coding downstream 127946 28093058 ~ 28097147 (-)
trnal-uaa_2 NA coding downstream 344880 27880131 ~ 27880213 (-)
LOC120556190 LOC104927843,LOC104965371,LOC100704236 coding downstream 353836 27863663 ~ 27871257 (-)
LOC120555377 LOC101062555,LOC102216107,LOC102302772,LOC101473643 coding upstream 177 28225624 ~ 28227538 (-)
gse1 gse1 coding upstream 14083 28239530 ~ 28420256 (-)
atmin atmin,LOC102791907 coding upstream 231953 28457400 ~ 28464778 (-)
cenpn cenpn,LOC102790979 coding upstream 240578 28466025 ~ 28469643 (-)
LOC120555776 cdyl2,LOC102790696 coding upstream 253421 28478868 ~ 28507241 (-)
G30586 NA non-coding downstream 186886 28037134 ~ 28038207 (-)
G30579 NA non-coding downstream 206018 28011000 ~ 28019075 (-)
G30576 mc1r non-coding downstream 223665 28001197 ~ 28001428 (-)
G30551 LOC102797876,LOC102077336,LOC101469017,LOC102307906,LOC103372225 non-coding downstream 267469 27956247 ~ 27957624 (-)
G30519 NA non-coding downstream 326708 27897943 ~ 27898385 (-)
G30644 NA non-coding upstream 117253 28342700 ~ 28392518 (-)
G30691 NA non-coding upstream 443151 28668598 ~ 28668964 (-)
G30759 NA non-coding upstream 914907 29140354 ~ 29140638 (-)
G30852 pax6 non-coding upstream 1161310 29386757 ~ 29396683 (-)
G30898 NA non-coding upstream 1389993 29615440 ~ 29616375 (-)
dbndd1 dbndd1,LOC103136566 other downstream 151614 28046759 ~ 28073479 (-)
G30577 mc1r other downstream 222623 28001640 ~ 28002470 (-)
G30465 furin,LOC102777676 other downstream 453283 27766831 ~ 27771810 (-)
G30422 got2 other downstream 591471 27626893 ~ 27633622 (-)
G30319 NA other downstream 908935 27310171 ~ 27316158 (-)
LOC120555801 LOC103366895,LOC102194278,LOC102079963,LOC102301182,LOC101475385,LOC102792507 other upstream 222509 28447956 ~ 28550000 (-)
G30693 NA other upstream 443744 28669191 ~ 28669868 (-)
mafa maf,LOC101477682,LOC100702616,LOC102790406,LOC102298902,LOC104927625,LOC102192535,LOC105919746 other upstream 544554 28770001 ~ 28846965 (-)
LOC120555471 hipk3 other upstream 992406 29217853 ~ 29269183 (-)
prrg4 NA other upstream 1085103 29310550 ~ 29314709 (-)

Expression


Co-expression Network