G31027 (LOC104955499,LOC103375803)


Basic Information

Item Value
gene id G31027
gene name LOC104955499,LOC103375803
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 30421690 ~ 30424323 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU41220
TTGTGATGATTTTTGAGGACATAATAATGCCCCCTTGCTTTATTTAATGTCACCTGGAGAAACATACACTATTACAACTTGCTGAGTATGATACAGCAAAACTATATAGCAACAACTCATAGAAAAAATGGCTTGTacaaaaagtttttattttatacattttctttgtccATTCTACCTAGGAATTTATCAAATAAATAACGGAGCGAATATAATAATTTCTGCAGTCTAGAGAGTCTCTGCGTGAGTCTTCATATGAATAATTAAATGGGAGCGCCGAATGAATCTTTTTCCACAAGCAGTGCAACTATATGGCCTCTCCCCTGAATGAGTCTTCATGTGGCGTGTTAAATTAGACTGCGCACTGAATTTCATATTACATACAATGCAAATGTATGGCTTCTCACCAGTGTGAATTATTGTATGCTTAATGAGATCCGCTTTCTCTCTAAAACTTTTTCCACAGTCAGTACAGACGTGAGGCTTCTCTCCCGTGTGGATTCGAATGTGGGCATTCATGTTTCCAACTTGTGTGAAACCTCTGCCACAGAAACTACATGTGTGCGGTTTCTGTCCGGAGTGAGAGTTCATGGGCTCCTGGTCATCCTCACATAAGCCAGTCTTCTTCTCACAGCGATACTGCTCTGAGGGAGCGTCCTCTTCCTGGACAGAAAGCTGCAGGGGGGCTTCACAGTATCACACATGAGAAAAGAAATGAGACCTCCCAGTGTCAGCGCTGCTCAGAGGCTAAAGTTAACCTGTCGTCAACGTAACTTACCTTTCCACCCGGCCAGCCTTCTTCGTTGTTGGTAGACCTCCTTTTTTGAACGAAAAACTATCTCCTCATAGTCTTTAATAGTTGTTTCAAATATGCTGAATATGTCCTCAGCGGCGGCTTTCAGTCGCTCATTGACCAAAGCTTTTAGTTTCTCTGTTTTGAACATTTCCGCTGATAACAGAAGACCACCAGTCCGTCTGACTGTTCCCTGGATCCTCCTCACGGGCTGACAGAAGACTGGCTGCTCACTGGGTTGCCACATATCGCGAGAGAAACAAGCAATCTCAGATGATTCCTTAAACAATTATTTGTGTTAGCC
>TU41221
TTGTGATGATTTTTGAGGACATAATAATGCCCCCTTGCTTTATTTAATGTCACCTGGAGAAACATACACTATTACAACTTGCTGAGTATGATACAGCAAAACTATATAGCAACAACTCATAGAAAAAATGGCTTGTacaaaaagtttttattttatacattttctttgtccATTCTACCTAGGAATTTATCAAATAAATAACGGAGCGAATATAATAATTTCTGCAGTCTAGAGAGTCTCTGCGTGAGTCTTCATATGAATAATTAAATGGGAGCGCCGAATGAATCTTTTTCCACAAGCAGTGCAACTATATGGCCTCTCCCCTGAATGAGTCTTCATGTGGCGTGTTAAATTAGACTGCGCACTGAATTTCATATTACATACAATGCAAATGTATGGCTTCTCACCAGTGTGAATTATTGTATGCTTAATGAGATCCGCTTTCTCTCTAAAACTTTTTCCACAGTCAGTACAGACGTGAGGCTTCTCTCCCGTGTGGATTCGAATGTGGGCATTCATGTTTCCAACTTGTGTGAAACCTCTGCCACAGAAACTACATGTGTGCGGTTTCTGTCCGGAGTGAGAGTTCATGGGCTCCTGGTCATCCTCACATAAGCCAGTCTTCTTCTCACAGCGATACTGCTCTGAGGGAGCGTCCTCTTCCTGGACAGAAAGCTGCAGGGGGGCTTCACAGTATCACACATGAGAAAAGAAATGTAAGCCTTAGTTTCATCATATATTTTGATTTGCAAATATTTAGCAGAGAGCGAGACAAGGCAGGTAGAACATGAAAATGTGTCCCAGCATATACAAATCTCAGAATTTTGCATGGTTTTGTTATGATGGGTAGTCTGCTCATGAAAAGATGGGAACAGCACCAGTGTAACTAGTCTCTTTcacaatacaacacatacaATGGTGCTTATCTT

Function

NR:

description
PREDICTED: zinc finger protein 32-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41220 True 1097 lncRNA 0.42 3 30421690 30424323
TU41221 False 929 lncRNA 0.40 2 30422942 30424323

Neighbor

gene id symbol gene type direction distance location
tacr2 tacr2,LOC103373147 coding downstream 60458 30353428 ~ 30361232 (-)
ddx21 ddx21,LOC102783051 coding downstream 243076 30166818 ~ 30178614 (-)
rnaset2 rnaset2,LOC103368766,LOC104927783 coding downstream 869217 29541607 ~ 29552473 (-)
LOC120555582 LOC106964557,LOC103462855,LOC102220269,LOC103136529 coding downstream 882955 29522758 ~ 29538735 (-)
rcn1 rcn1,LOC102786392 coding downstream 1046090 29352248 ~ 29375600 (-)
LOC120556252 pbld coding upstream 17924 30442247 ~ 30446660 (-)
rufy2 rufy2,LOC102778539 coding upstream 32917 30457240 ~ 30487984 (-)
LOC120556254 LOC104944274 coding upstream 65000 30489323 ~ 30491474 (-)
mis12 mis12 coding upstream 142467 30566790 ~ 30568574 (-)
rhoua rhou,LOC108237402,LOC107381884 coding upstream 182324 30606647 ~ 30610958 (-)
G31024 NA non-coding downstream 11634 30408105 ~ 30410056 (-)
G31013 hk1,LOC101156878,LOC107381906,LOC106513162,LOC102780719 non-coding downstream 77788 30343416 ~ 30343902 (-)
G30969 NA non-coding downstream 133257 30162480 ~ 30288433 (-)
G30905 NA non-coding downstream 759602 29661668 ~ 29662088 (-)
G30898 NA non-coding downstream 805315 29615440 ~ 29616375 (-)
G31110 NA non-coding upstream 145564 30569887 ~ 30585456 (-)
G31115 NA non-coding upstream 153963 30578286 ~ 30579304 (-)
G31146 NA non-coding upstream 275080 30699403 ~ 30726354 (-)
G31150 NA non-coding upstream 345260 30769583 ~ 30769809 (-)
G31155 NA non-coding upstream 358087 30782410 ~ 30785228 (-)
LOC120556497 csmd1,LOC102783723 other downstream 455943 29617320 ~ 29965747 (-)
elp4 elp4,LOC103373817 other downstream 960454 29402035 ~ 29461236 (-)
prrg4 NA other downstream 1106981 29310550 ~ 29314709 (-)
LOC120555471 hipk3 other downstream 1152507 29217853 ~ 29269183 (-)
mafa maf,LOC101477682,LOC100702616,LOC102790406,LOC102298902,LOC104927625,LOC102192535,LOC105919746 other downstream 1574725 28770001 ~ 28846965 (-)
fam120b fam120b,LOC104944276 other upstream 90932 30515255 ~ 30532142 (-)
cdc42se2 cdc42se2,LOC103398548 other upstream 1684249 32108572 ~ 32117250 (-)
G31602 ddx28,LOC106597432 other upstream 2467176 32891499 ~ 32894405 (-)
wdr76 frmd5,LOC103354945,LOC103374291 other upstream 2917924 33342247 ~ 33353448 (-)
znf710b LOC104936257,LOC102799163,LOC101477128 other upstream 3012488 33436811 ~ 33471335 (-)

Expression


Co-expression Network