fam120b (fam120b,LOC104944276)


Basic Information

Item Value
gene id fam120b
gene name fam120b,LOC104944276
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 30515255 ~ 30532142 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU41279
TCATTTGAATTTACATCAAGTAAACATTACACGGATATAAACTGCTCATGTACACCACAATTTTAAAAAATGGGTGTAAAAGGTCTTCAGTACTTTATGGACCGCTGCTGTCCAGAAGCCTGTGTGACTGTGAACCTGAGAGAAATGGCCAGACAACATGTTGCCAAAAACCAGCAAGGCTGCACAATCACAGATAACACTACCAGCCCCACACTCGTTGTGGATGGTATGGCCTGCCTGCGTCACTGGTACTCATGTAAGGACTGGGTGTGTGGGGGGCAGTGGAGGGAGTACATGGATGTGCTAAAGAGCTGG
>XM_039795670.1
TGACGCCACGCGTAGATAATAGGAAGTCATTTGAATTTACATCAAGTAAACATTACACGGATATAAACTGCTCATGTACACCACAATTTTAAAAAATGGGTGTAAAAGGTCTTCAGTACTTTATGGACCGCTGCTGTCCAGAAGCCTGTGTGACTGTGAACCTGAGAGAAATGGCCAGACAACATGTTGCCAAAAACCAGCAAGGCTGCACAATCACAGATAACACTACCAGCCCCACACTCGTTGTGGATGGTATGGCCTGCCTGCGTCACTGGTACTCATGTAAGGACTGGGTGTGTGGGGGGCAGTGGAGGGAGTACATGGATGTGCTAAAGAGCTGGTGGGGGGGCAGCATgccacttgttttttttgtggagttGCAGAATTGTGAGGAGTGGGTGAAGAGGAGACGCAGAGTGAATGGGGAGGTTTCTAAAATGTTTCGTCACATGAAGGCACATGGAGAGCAGCCTGGTAAAGAGCTATTTTGTCTGCCTTCTGGTCTGGCATCATTCACACCCTTTGCTCTCAGGTCATTAGGCCAGGAAGTGTTTTGCTCAGTGCGGGAGGCTGACTACGAGATTGCCAGCTATGCTCGTCAGCATGGCAGTATGGGAATTCTAGGACAGGATTCAGACTTCATCATATATGACAGTGCCCTCTACTTGTCTGTGGCAAAGCTGCGGATAGACAGCCTCACTACTGTCATGTACCACCGACAAAGGCTCTGCCAAACAATCGGATTGACTGTTACCCAGCTACCACTGCTGGCTTGTCTCCTAGGTAACGATGTGGTGTCAGAGGAACAGATGCAGCACATCAGGAACAGCGCCATGGCAGCAAACAGGATAAACAGTCCTGTACCTCACTCTGGTGCTCCTCAGGGGCAGATGGTGCTAGCTGTATCCCATCTTGTGAGCTCCTTGTGGGacagagaggagcaagagaCTGGGCTTATCCCTCAGTCTCTGAATCTATCAGCTCCTCAAAGAGAGCTACTGAAGAGGGGGGTTCGCTCTTACTTACTGCCTGGACAGGAAGCTCTTCAGCAAGATGACATGTCTGCACttccctctgcctttgagaaacaTTTTAGTCCCAAAATATTAAAGGCCTGTAGAGAGAAGCATGTAGCAGCAGAGGGTTTCATGGTTTACTATTACAGGCAGTTTGTGCCGCACGCCTACAAGCCCTGCAGACAACGCATCtatgggctgctgctgctgcacggGCATGAtgGCAGCAGTGTTGACCTTCCAGCAATCAGGGAGTGGTTTGTCTACTCTGGAAACCCTCTGAAGGAACCTGACATGGTCCACCCTGTCCCACTTGGCTTCCCAGgtGATCAGCCCAGTCTGGACTTGTTATGGTTCGGCACCAGTCCTGAAGTTTCTGCTCTTCGCCTGACGTCCTTCCTTTCGATTTTTGACTGCCAGGAGTATAAGGAGTTATATGGAGCTATTGAAGATTCCCTCCTGGCTGCTCTCTGCTTGGTCACTTACATAGTCCTCCAGgTACAAACGTTGTCTCAAGAGGACATGGATGCTTACCTGAGTCAGGCTGTGTGTCTGAGACTAAAATCCCCTCAGGAGCTTCAACAGATCAAGCTGCCTTTCCTCTCCAGTCGTGCAGTGCAGCTGGGATCCCTCTACGTCCGAGGACTGAGCCACCTGCTGGGTGCTAACTGTGCCAGCGGCTGCCCGCTGCCCAGCGCTGCCCTGATGCCTTGGCATAGCTTCGATGGGCGACTGTTCCACTCAAAGTACCTCCTGGCACATAGCGGCACAGAGAAGACTGTGTTGCTGGACAGCAATTCGTCCTGTTTGTCTCGATTTCTCTGCCTGAGAGAGAAACTTACAGAAACCTGCAGTAAGCGAGGCAGAGTCCTGCAGTCCAGACCCAATGCTCCAGAACATAGTCATAAAACCACACCAGGTGGTGTTCAAAACTggagggaaagaggagagaTGACAGGAGGCCATCGGCAtggaggaggatggagggagagaggggaggcaAGACGATACCCAAGAGAATATGAAAACGGAGAGAGACTatgggagagaagaggagggatgAGAGGAGGCCAttttcatcctcctcctcatccaaaCTGCCACGATGGAGAACCCCAGAACATGAGCCGTCCTCCAAATCGTTCCAGAGGTCCATCATACCGGAACAGAGGCAGATACCAGCTGTCTCCGAGATGGTCGCAACCTCCTGCACCAGGAACATGACTCTACCCCAGacgaagagaagagaagagaagagaagagaagagaagagaagagaagagaagagaagaggaggattAGAGGGGAGGATTTAAGAGGATAGGAAAGACATGATGAAAGGAGCGAAGGAATCAAATTTCTCTGAACAAACTGATTAGTGAATTACCCGTTAGGAATGTTTGTCTAAAAGATGCAGTAGGTCGAAAAAATGGGGATTAGGACGAGGCATATTGAAGAGATTAGGAATACATCATTTAAATTGCCAGTTTAAACTGaatttgtctttttgtgtgtctcGAAATAATCCTATTGACATAATAGGTAGTAAAGACTTTTAAAGTCAATCATCTCAGGGCATCTTACCTGTCTCACTGTTACAGAAAATGAACAGTACGCATGAGCACTcaccaaacaaacacagaaatgagacACTTCAAACATAAACTGAGAAGTGGATTAATGGTTGATCCTCAAGCCTGTTATCACCTCTTATCTTTTGACAATAAAAGGACAAAGATCTTAAAAGC

Function

symbol description
fam120b Predicted to be active in nucleus. Orthologous to human FAM120B (family with sequence similarity 120B).

NR:

description
constitutive coactivator of peroxisome proliferator-activated receptor gamma-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41279 False 315 TUCP 0.47 3 30530751 30532116
XM_039795670.1 True 2764 mRNA 0.49 16 30515255 30532142

Neighbor

gene id symbol gene type direction distance location
LOC120556254 LOC104944274 coding downstream 23781 30489323 ~ 30491474 (-)
rufy2 rufy2,LOC102778539 coding downstream 27271 30457240 ~ 30487984 (-)
LOC120556252 pbld coding downstream 68595 30442247 ~ 30446660 (-)
tacr2 tacr2,LOC103373147 coding downstream 154023 30353428 ~ 30361232 (-)
ddx21 ddx21,LOC102783051 coding downstream 336641 30166818 ~ 30178614 (-)
mis12 mis12 coding upstream 34648 30566790 ~ 30568574 (-)
rhoua rhou,LOC108237402,LOC107381884 coding upstream 74505 30606647 ~ 30610958 (-)
LOC120555751 tbp coding upstream 86715 30618857 ~ 30627325 (-)
psmb1 psmb1 coding upstream 99569 30631711 ~ 30634639 (-)
phf10 phf10 coding upstream 103031 30635173 ~ 30646025 (-)
G31027 LOC104955499,LOC103375803 non-coding downstream 90932 30421690 ~ 30424323 (-)
G31024 NA non-coding downstream 105199 30408105 ~ 30410056 (-)
G31013 hk1,LOC101156878,LOC107381906,LOC106513162,LOC102780719 non-coding downstream 171353 30343416 ~ 30343902 (-)
G30969 NA non-coding downstream 226822 30162480 ~ 30288433 (-)
G30905 NA non-coding downstream 853167 29661668 ~ 29662088 (-)
G31110 NA non-coding upstream 37745 30569887 ~ 30585456 (-)
G31115 NA non-coding upstream 46144 30578286 ~ 30579304 (-)
G31146 NA non-coding upstream 167261 30699403 ~ 30726354 (-)
G31150 NA non-coding upstream 237441 30769583 ~ 30769809 (-)
G31155 NA non-coding upstream 250268 30782410 ~ 30785228 (-)
LOC120556497 csmd1,LOC102783723 other downstream 549508 29617320 ~ 29965747 (-)
elp4 elp4,LOC103373817 other downstream 1054019 29402035 ~ 29461236 (-)
prrg4 NA other downstream 1200546 29310550 ~ 29314709 (-)
LOC120555471 hipk3 other downstream 1246072 29217853 ~ 29269183 (-)
mafa maf,LOC101477682,LOC100702616,LOC102790406,LOC102298902,LOC104927625,LOC102192535,LOC105919746 other downstream 1668290 28770001 ~ 28846965 (-)
cdc42se2 cdc42se2,LOC103398548 other upstream 1576430 32108572 ~ 32117250 (-)
G31602 ddx28,LOC106597432 other upstream 2359357 32891499 ~ 32894405 (-)
wdr76 frmd5,LOC103354945,LOC103374291 other upstream 2810105 33342247 ~ 33353448 (-)
znf710b LOC104936257,LOC102799163,LOC101477128 other upstream 2904669 33436811 ~ 33471335 (-)
serf2 NA other upstream 3034229 33566371 ~ 33569379 (-)

Expression


Co-expression Network