G31820


Basic Information

Item Value
gene id G31820
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 33714300 ~ 33715276 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU42292
AATGTTGCTAAagccttttgacattttatttgtttaaaatgatgtCCAGTACAAAATGTATACAGTAATACCCTTATGTCTGTCAGTTCCcctaaataaaatatttcaatcTGTTCAGCTCATGCCAGATAACAGTATCTATAAGATACACTAGATTGTAATTTGCTCATACAATAGTTCATGACAAAGATATAGCAATAGTACCTTTGTAACAATAAAAACTATCAGCAATATTTTGGTGGACACACTTTCAATACAATAAAATTACATACATTGTTCTGTAAAAGTTGCATTGCAATCTGCCCATACTTTACAAGATTTTCTAATTCATGTATATCTGTTCATTAACTAAGAGACAAAAGGTTGTGATACAATTctttatacatttataaaaaatgatCTGGTGGCAAACTGCATTGTAGCAGTGACTGAATCAGCAGGCTGTTCTCTCTGAAGCTGCTGTAACAGATGTACAATGcacttagatttttttttttttttttttttttaaacaaggcaACTTCTCAAacttcataataaataataaaccctCTGCAATGATATTGtacctgtatatatatatatataaacttgtaaaaaaaatttactaAAAAACAAAAGGTTAAGATGGTTGAATTGTGTTTGACACAGCATTTGgcgggataaaaaaaaaaacacgacacAGTCTGCATGCACTGGCTTCCATGGAAACACAAGTGTGATTCTTCCAGTTGATTGGGACAGCCTCTCTGCTCCTTGGCTTTGACTGAAATCAATCAGAACGATGTCTCCTTGTGACcattcactcactctctcttgcTTTAAACCGATCACAGCATCACCCTCATTGACTGGCGAGAATCTTTGACACCACCCCCTGGGTTGGAAGGGTCTTCTTGTGGGAACGTCACCTTATCTGGAGTGTAATCATTCCGCTTTAG

Function

GO: NA

KEGG:

id description
ko04138 Autophagy - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
TU42292 True 941 lncRNA 0.35 2 33714300 33715276

Neighbor

gene id symbol gene type direction distance location
LOC120555331 NA coding downstream 78809 33630063 ~ 33635491 (-)
si:ch211-107o10.3 LOC103374877 coding downstream 295397 33412665 ~ 33418903 (-)
LOC120556151 LOC103374288,LOC102776139,LOC100696842 coding downstream 323989 33362812 ~ 33390311 (-)
LOC120556152 LOC103374289,LOC104951771,LOC103354964 coding downstream 353994 33353861 ~ 33360306 (-)
cry5 LOC103354946,LOC104961892 coding downstream 451367 33254629 ~ 33262933 (-)
bcl2l10 bcl2l10,LOC102794833 coding upstream 8585 33723861 ~ 33728257 (-)
gnb5b gnb5,LOC104927313,LOC101156727,LOC108237408,LOC102225297 coding upstream 15858 33731134 ~ 33744672 (-)
myo5aa LOC103358162,LOC107099439 coding upstream 29867 33745143 ~ 33806294 (-)
fam214a fam214a coding upstream 102055 33817331 ~ 33851630 (-)
onecut1 onecut1 coding upstream 141810 33857086 ~ 33867260 (-)
G31707 NA non-coding downstream 378895 33333954 ~ 33335405 (-)
G31706 NA non-coding downstream 380362 33333098 ~ 33333938 (-)
G31705 NA non-coding downstream 381281 33329613 ~ 33333019 (-)
G31704 NA non-coding downstream 448625 33265318 ~ 33265675 (-)
LOC120556104 NA non-coding downstream 617322 33092815 ~ 33096978 (-)
G31822 NA non-coding upstream 1443 33716719 ~ 33718580 (-)
G31862 NA non-coding upstream 140622 33855898 ~ 33856166 (-)
G31881 NA non-coding upstream 464629 34179905 ~ 34180494 (-)
G31906 NA non-coding upstream 571012 34286288 ~ 34287080 (-)
G31907 NA non-coding upstream 571934 34287210 ~ 34287785 (-)
serf2 NA other downstream 144921 33566371 ~ 33569379 (-)
znf710b LOC104936257,LOC102799163,LOC101477128 other downstream 242965 33436811 ~ 33471335 (-)
wdr76 frmd5,LOC103354945,LOC103374291 other downstream 360852 33342247 ~ 33353448 (-)
G31602 ddx28,LOC106597432 other downstream 819895 32891499 ~ 32894405 (-)
cdc42se2 cdc42se2,LOC103398548 other downstream 1597050 32108572 ~ 32117250 (-)
LOC120555494 arpp19,LOC101481874,LOC103358163 other upstream 91642 33806918 ~ 33816388 (-)
G31955 NA other upstream 775384 34490660 ~ 34599541 (-)
cylda cyld other upstream 3144271 36859547 ~ 36882795 (-)
nod2 nod2 other upstream 3168375 36883651 ~ 36891304 (-)
ss18l2 ss18l2 other upstream 3515865 37231141 ~ 37253426 (-)

Expression


Co-expression Network