G32684



Basic Information


Item Value
gene id G32684
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 38369083 ~ 38371072 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU43399
CTAatacatagatagatggatgcTTTAATTAGTTTGATAATTTTATTTCAAGGTTTGAGCAAACATTTTCCATTTCTTGTTGTATATTCACatcataaacatattttttgatATTGTAACACTGATTACAACCATATCACCCAGTCAGTGTTAAAGTGGCAGGTGACTTTTTCCTCACAATTTGTGACTCTTGTAGCTGGTCTACTGATCACGTAGGGTGTCATAATGTTTTTCTGCCCATATTAGGCGAGCGACGTGTATGTCGTTGTCAATATTATTCTGGTCCCAGCAGTACTCGGGGGACAGCAGCCTGGTTGGTTTGTGAAGCCAAAAGTACTTGTTTAGATGACTCTCATCGTGCCACAGAGCCTCCACATCATTTAGTTTGTCCTCCATGATACCCAGAAAGCAGTGATCTGCCAAACTCTTCACATGTTCACACAGGCCTCCAAAAAGAGCAGCATGGTAGTAGTAATCTCCGTATTCCATGTAGGCTTTGGATTTGGGGTTTTTGTCATAGCTCCACATATCCTTTGGAAGTTTGTAAAAGTAGGCATGTACCAAAGCTACAGAATCCCCCAGAGCCTCGGAGCCAAATCTTCCCTTAAACTCCTGATCCACATCTAAGCAGAAGACGTAATTGCAGCGGTGACGAATCTCTGATTCTATGGTATCTGATATTGTTTTCATGCGCATCATAGAGATGTCCTGCCACCTGGAGTGCTTTTCCACCTGGATAACCTTCAGGCTTCGCTGAGGACCAAGGTCGATGTGTGGTACCTTGTCTGGTTGATCCGTGAACACGTAATATGTCACTTGTAATCCCAACATGAAATGTCGTTCTGCAGAGATAAGGAAAGTCTTCAGGTAGGCATCCAGTACTTTCCCACAGCAAACACGGTGAGGGCCACAGATGACTGGTTTTGGATGTGCATTTGGTCATAAAGAATGGGGTCAAACATCCCCTCCCAGATGATAGGAGCTTTCCAAGATGTGCGTGTTTCAACCCCCTGTCTGGCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU43399 True 1020 lncRNA 0.44 2 38369083 38371072

Neighbor


gene id symbol gene type direction distance location
LOC120556549 LOC101080058,LOC102311314,LOC102789927,LOC100707142,LOC101467933 coding downstream 99540 38261950 ~ 38269543 (-)
fam219b fam219b,LOC100706880,LOC107382042,LOC101467417 coding downstream 108103 38251110 ~ 38260980 (-)
LOC120555797 arid3b,LOC103462611 coding downstream 118964 38187575 ~ 38250119 (-)
LOC120556472 LOC103354314 coding downstream 225166 38131136 ~ 38143917 (-)
LOC120556171 LOC100695086,LOC102308943,LOC101465403 coding downstream 275476 38056451 ~ 38093607 (-)
LOC120555990 NA coding upstream 239760 38610832 ~ 38613388 (-)
LOC120555936 nell1 coding upstream 384853 38755925 ~ 39085464 (-)
LOC120555939 NA coding upstream 561873 38932945 ~ 38934607 (-)
prmt3 prmt3,LOC102792178,LOC102297811 coding upstream 871603 39242675 ~ 39305929 (-)
htatip2 htatip2,LOC102791710 coding upstream 936970 39308042 ~ 39315790 (-)
G32568 NA non-coding downstream 380895 37987103 ~ 37988188 (-)
G32556 NA non-coding downstream 383309 37985368 ~ 37985774 (-)
G32539 NA non-coding downstream 525526 37842235 ~ 37843557 (-)
G32484 NA non-coding downstream 626315 37741614 ~ 37742768 (-)
G32469 NA non-coding downstream 667555 37701241 ~ 37701528 (-)
G32742 NA non-coding upstream 756836 39127908 ~ 39128107 (-)
G32749 NA non-coding upstream 866735 39237807 ~ 39238018 (-)
G32751 NA non-coding upstream 870817 39241889 ~ 39242103 (-)
G32828 NA non-coding upstream 1172099 39543171 ~ 39607321 (-)
LOC120556195 NA non-coding upstream 1276875 39647947 ~ 39653298 (-)
LOC120556344 lrrc49,LOC102795887 other downstream 541812 37788725 ~ 37827271 (-)
ss18l2 ss18l2 other downstream 1115657 37231141 ~ 37253426 (-)
nod2 nod2 other downstream 1477779 36883651 ~ 36891304 (-)
cylda cyld other downstream 1486288 36859547 ~ 36882795 (-)
G31955 NA other downstream 3769542 34490660 ~ 34599541 (-)
slc6a5 slc6a5 other upstream 834203 39205275 ~ 39235746 (-)
LOC120556511 LOC102208128,LOC101468289 other upstream 1678552 40049624 ~ 40142048 (-)
LOC120556146 NA other upstream 2193169 40564241 ~ 40589664 (-)
G33122 NA other upstream 2277604 40648676 ~ 40662621 (-)
LOC120556513 NA other upstream 2290292 40661364 ~ 40663657 (-)

Expression



Co-expression Network