G33048


Basic Information

Item Value
gene id G33048
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 40207391 ~ 40208775 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU43873
ACTATAATCAGCATTTTTCCCTATTTTATGATATTTTACAGACTAAACCATTAAGAGAAAAACAGACCTATTGATATCCTAATACATAtcattatttgtattaattaaaagcAAAAACGTGTGCACTAAACCAAGGAACATTTTAATCTGTAATCCTGTGACATCACAAGCTCAGAATTCCTGTTTAATCTCTGCACAACTTTTCCTCTTTACAGTTGTGTTGGTCAGGAGCTCGACAACAAGAGGATTTTAGGCTCATGTTGTGGTGCAAGCTGAACacatgacaaacacacacacgtgaacacacacacgtgaacacacacacgtgaacACTCTCTGATAAAACAGTGCAACGCTCAATAAGAAATGCGTTAACTCTCCACAAACATCCAGcaatgtatgtttttgtgttctcTGCTTTCCAAAAAGTCAAAGGGGAGTCTCCTGCATCAGCCAAtcggcagacagacagagcaatCACCCCTGCCtgcagaacaaacacacacgtacatcATCTCAATCAATATCTTCACCGCTGTCCATCTTTGGAGGTTCAGAGCTTTGCAACGCATAAAACAACCCCCACAACAGAACAAACTGCCTCCAGATGGAATTCTGCAGGAGGCTGAGACGGAGAAGAGGGGGGCGGATCCCTGACTCCAGCCACTCCAACGAGCCGTAGCACGGAGAAGTCGGCACATGTGGACTCTGACAATGCGTTCGAAACCCCTCCAGACCTGCACGTGACTCAGCAAAAACCTTtttctaatttatttttttatttttatggatGTGACTCTCTGGAGCAGCAGGCTGGCCAGTTTGGCTGGATCAAACATGAGCCAGAGGAACAACAAGAAGGAAGCTTTGACGAGTTGAAGGGCAGGTTTTTGTCAACAGTAACACACCTCTGATTGGGCATTTTAATTTCCTTGACTTTCAACAAGATGGCATGCAGGAAAAGCCTGTTTTCAGAGAGCTGAATTTAGCTGCTTAAGATAAAATGTGAACCTCAACATCATTATAAACTGttcaaacacacattttaattcCTTCATGGATTCATCTGGATATTTTTCCTTCAATTAATCATTTCCCCATTGTGTGCACCATCTGTTGTCTAAATGTCAGCCATAATAATTAAGAACAGTGCATTGgggaaaaactttaaaaaaatggaaaacaatACAGGTATTCTCCATTCTTATAGAACTGTGGTGAGTCAGCCCGACTCTAAAAGGGTATTTAAAGGCCATCTACATTAGATAATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43873 True 1273 lncRNA 0.41 2 40207391 40208775

Neighbor

gene id symbol gene type direction distance location
slc22a18 slc22a18 coding downstream 268525 39931306 ~ 39938866 (-)
LOC120556430 LOC101156874,LOC103142636,LOC107083861 coding downstream 296940 39902668 ~ 39910451 (-)
LOC120555276 LOC100703294,LOC107381837,LOC103366994,LOC102295725,LOC102215676,LOC101474681 coding downstream 308874 39882936 ~ 39898517 (-)
mpped2a mpped2,LOC106524710,LOC102220360,LOC107083882,LOC100703837,LOC102192152,LOC107381839 coding downstream 413479 39721272 ~ 39793912 (-)
zdhhc13 zdhhc13 coding downstream 560485 39629922 ~ 39646906 (-)
samd4a samd4a,LOC102311861 coding upstream 36154 40244929 ~ 40313805 (-)
LOC120556512 glg1,LOC100701703,LOC101472041,LOC108242135 coding upstream 177322 40386097 ~ 40416063 (-)
LOC120556376 NA coding upstream 389994 40598769 ~ 40631125 (-)
LOC120556133 NA coding upstream 439572 40648347 ~ 40652751 (-)
foxr1 NA coding upstream 457497 40666272 ~ 40671602 (-)
G32952 NA non-coding downstream 158025 40048059 ~ 40049366 (-)
G32943 NA non-coding downstream 168931 40026134 ~ 40038460 (-)
LOC120556076 NA non-coding downstream 221612 39974853 ~ 39985779 (-)
G32923 NA non-coding downstream 260280 39944371 ~ 39947111 (-)
G32922 NA non-coding downstream 260812 39943413 ~ 39946579 (-)
G33061 NA non-coding upstream 72698 40281473 ~ 40394703 (-)
G33068 NA non-coding upstream 122975 40331750 ~ 40334947 (-)
G33109 NA non-coding upstream 353417 40562192 ~ 40563931 (-)
G33167 c1qtnf4,LOC102794664 non-coding upstream 709452 40918227 ~ 40918584 (-)
G33168 NA non-coding upstream 711559 40920334 ~ 40925054 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 65343 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 971645 39205275 ~ 39235746 (-)
LOC120556344 lrrc49,LOC102795887 other downstream 2380120 37788725 ~ 37827271 (-)
ss18l2 ss18l2 other downstream 2953965 37231141 ~ 37253426 (-)
nod2 nod2 other downstream 3316087 36883651 ~ 36891304 (-)
LOC120556146 NA other upstream 355466 40564241 ~ 40589664 (-)
G33122 NA other upstream 439901 40648676 ~ 40662621 (-)
LOC120556513 NA other upstream 452589 40661364 ~ 40663657 (-)
sirt3 sirt3 other upstream 1548852 41757627 ~ 41764896 (-)
G33711 NA other upstream 2190516 42399291 ~ 42402136 (-)

Expression


Co-expression Network