G33068


Basic Information

Item Value
gene id G33068
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 40331750 ~ 40334947 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU43903
tctatttatgttATTTACTTCTGATAATTGGTCTATCTATTCCACAAACAACAATCTGTGCCAAAACTGTTTATTATATTAGTTAAGACAAAGGTTTTGTGATCTGCGTATCCGTCACATTTCTAAAAATGTACCACCAGCACACAAACAACAAGTTTCGGTATTTTTCGTAGGAAAGAAATCTTGAATAAATGTCAACCAACAAGCTACACATGGAGAAATGAGTTCTCGAAGTGTACCTGAAGGCACCATTAACCCAGACCTACTGATATAActgggttacacacacacacacacacacacacacacacagaaaattagataaaaatatattattttcattCTCAAACAGTTCCTTATCTTAACACAAATGTTTCttgtttaaattaaatgaacattttgcaaaactattgcatatatatattcatcaaaAATCAGTTTGCTTTACAAACAGCGCCATCCTCAGGACACCAgcacaatcacaaaaacactgcGCAACTGGCCACTTAAAGCACATttccatataaaaaaaaaatcagtttctTCTAATcgctgacatttttacagtttcaCTCAACAAAATACTTTAAGCCACATTCATATAATGGTAAGTATTAAATATTATCAGAAGTTTAACGTGTCAAGACTTCAAATCTAATTTTAGAAAAATTACTATATTctttccaaaaaaacaaaactctgactcagcagtggtggaatgtaactaagtaggcTACAATTATGTTgtgcttaagtacaaatttgaggtactttcaTTTGATGCTACTTTTTTACTTgggctccactacatttcagagacaaatattgcactttttaaccacactgcatttattttacagctttaattaatctgcagatttgGAGTTATTAACAGAAATATAATCcacaaataaattatatattgaACGATATCTTAatatagaagaagaaaagtgtCTGATGTGtaatttaaattatatagaacatgagttacattttgttttcctACACGGTCCTTTTTACTGTGAACAGCGTGATGCTTGTCTAGTAAGACAAAAACAGATATTGATTTTgtaaatatggatgatgctcAAAGACTGAGATGGCTGTTCATATGTGAAGCAAATACATTATCCAGTAATATTGAGAAAGCCTTGGagaagagggggagaaaaagCTCTATCTGTAAATATTTGATTGtttgtacagtttttttttttctccacatgATTTGTATATGCGAGACAGGAAGATGTCTGTTAAATACTGCTGTCCTGTAATCCCATATGGGATGGGCCACATGcttggcatgacacagaaataaaagaaaaccaaCTAGCTTTTATAGATTAAGCTATCCAGCagtatttaacccttgtgttgtcttcgggtcaaatttgacacgttttttaagtttctgtagcagaaatttggatttctttcaaccaaacgGTTGGTTCCATGAAACGCTCCTCACAAGTCAAATTaagcagtccttccagaaaaatgcgttgtttttttgtgattgttgcgggcaaaaatccttgattatgcggcacgttttcttaaaaaatgcgaaggactatgcgggatatttatgcaattttatgcgttgaaattgcaggaacttgcaaaacttgcggaaacttgcaaaaactgcggtttgatgaaaaagagaaaaaacagtgattcctccaacaccctgctttttgatgatgttcacgtcgcgtaattaagTCACTACatacgttcccatggcaacgggaaaatggctgctcttgtgtaaagtaaacacaacatttttcagctttctgctaagatatattatgggacttttttgaaacgaaaatgcggggattatgaaatcatgcatattatttatttattttttttgaacatTTCTTTATTGATTTTTCAGTGACTTAACAAAATCAAGAGGTAACATTTCGGGAGTCAAAACAGTGTCAAGtacaagccccgcatattttgcgcgaaaTTTATGCGTCGAAACattgtatttgaaaaaatgcaggccccgcataaatatgcggactttggctgattatgcattgaattatgcataatcgcgtttttctgaaGGGACTGATtaaggatcagttcactactatCAGTGacttttggatgttttattcaattttatagcattattctgactaaactttgacagtctacgattatccatcaacatcctctgatcttaaatattagtcaaaataattcatactttctgcttttttaactcaaaagttAGATATAATTTCATAGGCTATATCAGGTTTAGTAAccagaaattaaaaaaatagtggtaataagttgctGTTAGAACTGGTGGTAGTAGGTAAAAAAGCGCTTAAAATGTCgaacaatgttacaaaaatgtttttaaaaaacagcaaaataagcaataaaaaaacagtgttcattttcaattttgacccagaaggacaacacaagggataaaGTAATTACAAtgagctccacctttaccagctgcaacattaaagcgATGAACACATTAACGCATCAATAATCATAATCCGGTAATATAGTATATTCTGAAATGAGCCATTCTTCATaaggagtacttttacttttggtgctCTAAGTATTTTGATGCGGATTCCTTtggacttttacttgagtaggaTTGAATAGGAGTATGAGCTGTGCTTCATGAACCGAACTGGGCTTTAAACACCGAAAAAAAACGTTACTGACAGttggctgcacgatatgaggaaaatgtgcAATATGCTATTATCAAATTTTAAAAACCTAttggtaacgttaacgttactctcATAAAATATACAAAAGTTTACAGGAAGCCTTCTCCTATACCAAACCTGATGCTgatttttacttgagtaagattttgaatgcagaacttttacttGGAACGGAGTATTTCCATTgttcctccaccactgcttcACCTTTAAAGCTGATCTTCATGTTAAACCCTGATGGAAGTTTAAAAGACATTTTAGCAGGACTGAAGCAGGAGAGCCAGTCGGTCTCTCCATCGTCACCGCTCCTCTGCGAGCAGCGATCTGAAGTTCTTCAGCTCTCGGATGCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43903 True 3102 lncRNA 0.34 2 40331750 40334947

Neighbor

gene id symbol gene type direction distance location
samd4a samd4a,LOC102311861 coding downstream 17945 40244929 ~ 40313805 (-)
slc22a18 slc22a18 coding downstream 392884 39931306 ~ 39938866 (-)
LOC120556430 LOC101156874,LOC103142636,LOC107083861 coding downstream 421299 39902668 ~ 39910451 (-)
LOC120555276 LOC100703294,LOC107381837,LOC103366994,LOC102295725,LOC102215676,LOC101474681 coding downstream 433233 39882936 ~ 39898517 (-)
mpped2a mpped2,LOC106524710,LOC102220360,LOC107083882,LOC100703837,LOC102192152,LOC107381839 coding downstream 537838 39721272 ~ 39793912 (-)
LOC120556512 glg1,LOC100701703,LOC101472041,LOC108242135 coding upstream 51150 40386097 ~ 40416063 (-)
LOC120556376 NA coding upstream 263822 40598769 ~ 40631125 (-)
LOC120556133 NA coding upstream 313400 40648347 ~ 40652751 (-)
foxr1 NA coding upstream 331325 40666272 ~ 40671602 (-)
LOC120556279 atp6v0d1,LOC103462946,LOC107563463 coding upstream 337968 40672915 ~ 40682357 (-)
G33048 NA non-coding downstream 122975 40207391 ~ 40208775 (-)
G32952 NA non-coding downstream 282384 40048059 ~ 40049366 (-)
G32943 NA non-coding downstream 293290 40026134 ~ 40038460 (-)
LOC120556076 NA non-coding downstream 345971 39974853 ~ 39985779 (-)
G32923 NA non-coding downstream 384639 39944371 ~ 39947111 (-)
G33109 NA non-coding upstream 227245 40562192 ~ 40563931 (-)
G33167 c1qtnf4,LOC102794664 non-coding upstream 583280 40918227 ~ 40918584 (-)
G33168 NA non-coding upstream 585387 40920334 ~ 40925054 (-)
G33196 NA non-coding upstream 601894 40936841 ~ 40937064 (-)
G33347 NA non-coding upstream 1110582 41445529 ~ 41445742 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 189702 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 1096004 39205275 ~ 39235746 (-)
LOC120556344 lrrc49,LOC102795887 other downstream 2504479 37788725 ~ 37827271 (-)
ss18l2 ss18l2 other downstream 3078324 37231141 ~ 37253426 (-)
nod2 nod2 other downstream 3440446 36883651 ~ 36891304 (-)
LOC120556146 NA other upstream 229294 40564241 ~ 40589664 (-)
G33122 NA other upstream 313729 40648676 ~ 40662621 (-)
LOC120556513 NA other upstream 326417 40661364 ~ 40663657 (-)
sirt3 sirt3 other upstream 1422680 41757627 ~ 41764896 (-)
G33711 NA other upstream 2064344 42399291 ~ 42402136 (-)

Expression


Co-expression Network