G33109


Basic Information

Item Value
gene id G33109
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 40562192 ~ 40563931 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU43948
TTGAGCTTAAATTGTATTCCATATTAACAGTCTGcttctaaaatgttttgcattcaATTTCTCAGAACTTTATTACCtctgccaaggaggttatgttttcggtACGGtttgtttgtcagcaggattTTGAAAATATTACTGGCCCAAATATCATAAAACTTAATGGAAGAgggtagcatgggccaaggaagaacccattacattttggagtgaACCGGAATCACGTACTCGTAACTTTTAgagtattttttataaaagcTTAAATGtttcttgtaggctactttttatcACAAGTATTGTCATGTGTACAATAGTCATGAGTACAGGTGTACTCAGTctgtttacctgtctgtctgtttacctgtctgtctatctgtttacctgtctgtctgaagtGGCTGGTGTCTGAGAAGTGACACTGCACTCAGCTGACCCTCCAGAAAAGATTAATGTTGAATGTGTACGTTTACCAGCCGACTGgcagggggttagggttagagtcaTACCTAAGCCAGGCGTAGCAGTTTGTGAGCTATACATAAATGCCCaactataaaataaaattaaggaTGAGGACATTATGGGTTAAGGTGCCTCTACCTTAATTGATCAATGATTTAATTAAGAAAAATAGCAGAGCTGATGTTGGAAATTATAGGCAAGTATCAATTCTGTCAACTATATGAAATATTTCTGAGCGGCTTCTATATGAACAGGTGGAGGAGTATCTCATCAGGCTTGATCTTTTATATGAGCTCCAGTCTGGTTTTAGAGCTGCATATTCTACTGACACCTGTCTCACTCACCTTTTCGACTATGTGAGTCAGAATTTTAATCAAGGGAATTATGTTGGTATGCTACTACATGGTTCACTTCTTACCTAACAGATAGAACTCAACTCTGTGATGTTGAGGGGACCCTCTCTGAGCCACAGAGTATAACATGTGGGGTGCCCCAAGAATCAATCCTGGGGACCCTGTTATTTTTAGTATATATGAATGACATATTAGCTGCGGTATGGTGCAAGTTACTATTATATGCTGATGATTCTGCTTTACTTGTCCCAGGGTGTAATGTAAAAGACATTGAAAATACTCATTGGCAGAAAGCTTGAGTCTGTCAACCAGTGGCTAGTAGACAATAAGCTATCTATGCATCTGGGCAAGACTGAATCAATCTTGTTTGGTACAAAAAGGAAGTTGGCAAAATCAAATACTTTAAAGGTGATGTGTAATGGGTCTGAAATTGTATCCAGTCAAGTGTCACATATTTGGGTTTAACATTGGATCAATCACTTATAGCTGAATCCATTGCAGCCAAGGTTTTAGCAAAAAGTGCCTATAAGTTGAAGTTTTTATATCGCAAGGCAACGGTTTTTGATTTTTCTGTAAAGAAATTATTGGTATTAACTCTGATTCAATGTCATTTGGATTTTGCTTGCTCTGTATAGTTTTCTGGGTTGACTGTGAAACCAAAACAGTGTTATTCTGTACCTGTTAAAAGCACTCCCCTGTACTCATATAGGTAGGGAGGAGTTTACAAGAGCTGGTCTACTACCCGTACATCTAAGAGTAGAACAACTTAAGCTGAACTATATGTTTAACATTGTTAATGGTCATGCCCCCAAATATTTATGCTCTAATGTAACCATGGTCCATATGCAGCATAGTCATAATACTAGGGCCAGTATAGTTTCTAGAGCTAATAATgcaattaaaaattaaaaattattatataaCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43948 True 1740 lncRNA 0.38 1 40562192 40563931

Neighbor

gene id symbol gene type direction distance location
LOC120556512 glg1,LOC100701703,LOC101472041,LOC108242135 coding downstream 146129 40386097 ~ 40416063 (-)
samd4a samd4a,LOC102311861 coding downstream 248387 40244929 ~ 40313805 (-)
slc22a18 slc22a18 coding downstream 623326 39931306 ~ 39938866 (-)
LOC120556430 LOC101156874,LOC103142636,LOC107083861 coding downstream 651741 39902668 ~ 39910451 (-)
LOC120555276 LOC100703294,LOC107381837,LOC103366994,LOC102295725,LOC102215676,LOC101474681 coding downstream 663675 39882936 ~ 39898517 (-)
LOC120556376 NA coding upstream 34838 40598769 ~ 40631125 (-)
LOC120556133 NA coding upstream 84416 40648347 ~ 40652751 (-)
foxr1 NA coding upstream 102341 40666272 ~ 40671602 (-)
LOC120556279 atp6v0d1,LOC103462946,LOC107563463 coding upstream 108984 40672915 ~ 40682357 (-)
ndufs3 ndufs3 coding upstream 365539 40929470 ~ 40934556 (-)
G33061 NA non-coding downstream 167489 40281473 ~ 40394703 (-)
G33068 NA non-coding downstream 227245 40331750 ~ 40334947 (-)
G33048 NA non-coding downstream 353417 40207391 ~ 40208775 (-)
G32952 NA non-coding downstream 512826 40048059 ~ 40049366 (-)
G32943 NA non-coding downstream 523732 40026134 ~ 40038460 (-)
G33167 c1qtnf4,LOC102794664 non-coding upstream 354296 40918227 ~ 40918584 (-)
G33168 NA non-coding upstream 356403 40920334 ~ 40925054 (-)
G33196 NA non-coding upstream 372910 40936841 ~ 40937064 (-)
G33347 NA non-coding upstream 881598 41445529 ~ 41445742 (-)
G33368 NA non-coding upstream 996901 41560832 ~ 41565475 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 420144 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 1326446 39205275 ~ 39235746 (-)
LOC120556344 lrrc49,LOC102795887 other downstream 2734921 37788725 ~ 37827271 (-)
ss18l2 ss18l2 other downstream 3308766 37231141 ~ 37253426 (-)
nod2 nod2 other downstream 3670888 36883651 ~ 36891304 (-)
LOC120556146 NA other upstream 310 40564241 ~ 40589664 (-)
G33122 NA other upstream 84745 40648676 ~ 40662621 (-)
LOC120556513 NA other upstream 97433 40661364 ~ 40663657 (-)
sirt3 sirt3 other upstream 1193696 41757627 ~ 41764896 (-)
G33711 NA other upstream 1835360 42399291 ~ 42402136 (-)

Expression


Co-expression Network