LOC120556513


Basic Information

Item Value
gene id LOC120556513
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 40661364 ~ 40663657 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU43971
CCCACCCTTCGCTACGAGCTGGTCAGCGTGCAGCCTGGAGAAGACCAAGACTACGTGATGAACAGGGTCATGGAGGCCGAAACTGAGGAGGTGTGGGCAGGCCTCCGTTTCCTGGCCGGTGAATGGCTGTGGGTGAACGGGGCGAGTATGTTGTACTCTGACCTGCCCCTCTGCCCCCCCCTGGTGCAGCACTGTGGAGCCTTGTCCAAGAACAACACAGGGAGCATGGAGACCAAAGACTGTTCTGAGAAAAGGAACTTCCTGTGTTATAGCACATCCTGACATCACCCCTATCATCTGCATCAGGGTGGTCACTAGCAGAAGTTTATCTAAGTTGGCACACAGCTTCTCAAGACAGTAGACATACAACCGTGTAGGCTTTC
>XM_039796158.1
ATGCTCTCTGGACCGGTGATCGCTCCAAGTGGAGGAAACGGAGAGGGAGAGCCAGACAAGGTCCAGAtaaaggagAACAAGACGTGGGAGGAGGCGCTGGAGCACTGCCGAGCCCTCAGTTCAACCTCCCAACCCACCCTTCGCTACGAGCTGGTCAGCGTGCAGCCTGGAGAAGACCAAGACTACGTGATGAACAGGGTCATGGAGGCCGAAACTGAGGAGGTGTGGGCAGGCCTCCGTTTCCTGGCCGGTGAATGGCTGTGGGTGAACGGGGCGAGTATGTTGTACTCTGACCTGCCCCTCTGCCCCCCCCTGGTGCAGCACTGTGGAGCCTTGTCCAAGAACAACACAGGGAGCATGGAGACCAAAGACTGTTCTGAGAAAAGGAACTTCCTGTGTTATAGCACATCCTGACATCACCCCTATCATCTGCATCAGGGTGGTCACTAGCAGAAGTTTATCTAAGTTGGCACACAGCTTCTCAAGACAGTAGACATACAACCGTGTAGGCTTTCAACACACATTAAGGGAATATGTATCCTACTATGGAATATCTTTGCAAAAGTTTGATCaaactttataataaaacttTCTGACTGTAAACTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU43971 False 383 lncRNA 0.55 2 40661458 40662555
XM_039796158.1 True 609 mRNA 0.51 3 40661364 40663657

Neighbor

gene id symbol gene type direction distance location
LOC120556133 NA coding downstream 8613 40648347 ~ 40652751 (-)
LOC120556376 NA coding downstream 30239 40598769 ~ 40631125 (-)
LOC120556512 glg1,LOC100701703,LOC101472041,LOC108242135 coding downstream 245301 40386097 ~ 40416063 (-)
samd4a samd4a,LOC102311861 coding downstream 347559 40244929 ~ 40313805 (-)
slc22a18 slc22a18 coding downstream 722498 39931306 ~ 39938866 (-)
foxr1 NA coding upstream 2615 40666272 ~ 40671602 (-)
LOC120556279 atp6v0d1,LOC103462946,LOC107563463 coding upstream 9258 40672915 ~ 40682357 (-)
ndufs3 ndufs3 coding upstream 265813 40929470 ~ 40934556 (-)
ptpmt1 ptpmt1,LOC102795413 coding upstream 274158 40937815 ~ 40948565 (-)
prc1b prc1,LOC102796011 coding upstream 289258 40952915 ~ 40973681 (-)
G33109 NA non-coding downstream 97433 40562192 ~ 40563931 (-)
G33061 NA non-coding downstream 266661 40281473 ~ 40394703 (-)
G33068 NA non-coding downstream 326417 40331750 ~ 40334947 (-)
G33048 NA non-coding downstream 452589 40207391 ~ 40208775 (-)
G32952 NA non-coding downstream 611998 40048059 ~ 40049366 (-)
G33167 c1qtnf4,LOC102794664 non-coding upstream 254570 40918227 ~ 40918584 (-)
G33168 NA non-coding upstream 256677 40920334 ~ 40925054 (-)
G33196 NA non-coding upstream 273184 40936841 ~ 40937064 (-)
G33347 NA non-coding upstream 781872 41445529 ~ 41445742 (-)
G33368 NA non-coding upstream 897175 41560832 ~ 41565475 (-)
LOC120556146 NA other downstream 71700 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 519316 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 1425618 39205275 ~ 39235746 (-)
LOC120556344 lrrc49,LOC102795887 other downstream 2834093 37788725 ~ 37827271 (-)
ss18l2 ss18l2 other downstream 3407938 37231141 ~ 37253426 (-)
sirt3 sirt3 other upstream 1093970 41757627 ~ 41764896 (-)
G33711 NA other upstream 1735634 42399291 ~ 42402136 (-)
G33796 NA other upstream 2321566 42985223 ~ 42990770 (-)
G33847 NA other upstream 2550977 43214634 ~ 43214987 (-)
G33914 NA other upstream 2789055 43452712 ~ 43456847 (-)

Expression


Co-expression Network