G33416


Basic Information

Item Value
gene id G33416
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 41676977 ~ 41867839 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU44365
cctaggtaaggactactagccagtcagaagcagagtatgagggcgtaccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccatgctagcagctaggcgagcattataacgtgtgttccaaagtgaccatgtgtgtctctgaagtaaaggctggactacaacagagctgtttggagcagttggtgaacagtgttttctgttggagatggtaagtccctttgggggggactttgggctttttcactttgtaaacctataacgtgcacaaaaaagatatataacactataaaggaaagggaaaaagcataatatgagcactttaagttaaaTCAATAACATCAAAGTTAAGAGAATGCCATCATAtttataaaacatgtttaacagATGAGTGAAATTGAGGCCACACATGATTTATTAACCATGAATAAACCCGTCCTAAAGGATGCCTTATTAGAAAGTTGTAATGATCAggatttgttcatttatttaacattttatttttcaggtATTTAATTCACTTGACATTTGTTATATATGTTTCTAAATTGAATTTTCAGGACATTTACTATATCATTTTTACGATGTAAAATGACCACGATAGATTTGATCTGCATCTCCTGCTCCTGATTGGTGTCCGCAGTGACGCGGCTCGCTGTGGTGCTGCGATTAGGATTTCACTCTCACTCTGTTCAAGCTTTACTAAACTGGATTTTATAGTGAAAAATACATGTGAAGAGAACTCTACTGAATACTAAACCGCCGAGAGGAAGTTTTTATGTGGACTGTATTTTTATTGAGCATGTTAAGTAAAATAACTTGTTTTATGGATATATAGCCTACATGGTTAATGTATAGTTGACTTTTTGTACATTAAAAGTGATTGAGGGAATAATAAAGTTTAAAGGTTTTGTTGAGT
>TU44368
ctcttttcaccctgtgtgttgagctctctgttttagctacagaatgagacatctcacttctgttccatctttgttgggagtcgcacatgcgcagtacctaggtaaggactactaaccagtcagaagcagagtatgagggcatgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtaccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagtgccatgctagcagctaggcgagcattataacgtgtgttccaaagtgaccatgtgtgtctctgaagtaaaggctggactacaacagagctgtttggagcagttggtgaacagtgttttctgttggagatggtaagtccctttgggggggactttgggctttttcactttgtaaacctataacgtgcacaaaaaagatatataacactataaaggaaagggaaaaagcataatatgagcactttaagttaaaTCAATAACATCAAAGTTAAGAGAATGCCATCATAtttataaaacatgtttaacagATGAGTGAAATTGAGGCCACACATGATTTATTAACCATGAATAAACCCGTCCTAAAGGATGCCTTATTAGAAAGTTGTAATGATCAggatttgttcatttatttaacattttatttttcaggtATTTAATTCACTTGACATTTGTTATATATGTTTCTAAATTGAATTTTCAGGACATTTACTATATCATTTTTACGATGTAAAATGACCACGATAGATTTGATCTGCATCTCCTGCTCCTGATTGGTGTCCGCAGTGACGCGGCTCGCTGTGGTGCTGCGATTAGGATTTCACTCTCACTCTGTTCAAGCTTTACTAAACTGGATTTTATAGTGAAAAATACATGTGAAGAGAACTCTACTGAATACTAAACCGCCGAGAGGAAGTTTTTATGTGGACTGTATTTTTATTGAGCATGTTAAGTAAAATAACTTGTTTTATGGATATATAGCCTACATGGTTAATGTATAGTTGACTTTTTGTACATTAAAAGTGATTGAGGGAATAATAAAGTTTAAAGGTTTTGTTGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44365 False 941 lncRNA 0.37 2 41676977 41867839
TU44368 True 1091 lncRNA 0.38 2 41676977 41768267

Neighbor

gene id symbol gene type direction distance location
ppip5k1a ppip5k1 coding downstream 176570 41453032 ~ 41500407 (-)
tp53bp1 tp53bp1,LOC104941490 coding downstream 284162 41361515 ~ 41392815 (-)
LOC120555591 cdkn2aip,LOC102799175,LOC108249214 coding downstream 331782 41342668 ~ 41345195 (-)
iqgap1 iqgap1 coding downstream 403618 41199741 ~ 41273359 (-)
crtc3 LOC103367860 coding downstream 485280 41146518 ~ 41191697 (-)
LOC120556217 NA coding upstream 36930 41904769 ~ 41910826 (-)
LOC120556548 LOC104961102,LOC105919414,LOC102215897 coding upstream 132390 42000229 ~ 42017731 (-)
pole3 pole3 coding upstream 175350 42043189 ~ 42050360 (-)
herc1 herc1 coding upstream 397654 42265493 ~ 42341342 (-)
dapk2a LOC104966057,LOC103365817 coding upstream 481857 42349696 ~ 42363832 (-)
G33383 LOC103462981,LOC106924557,LOC102221671,LOC103155220 non-coding downstream 4115 41670400 ~ 41672862 (-)
G33371 znf408,LOC104941494 non-coding downstream 105741 41571002 ~ 41571236 (-)
G33369 NA non-coding downstream 110557 41566215 ~ 41566420 (-)
G33368 NA non-coding downstream 111502 41560832 ~ 41565475 (-)
G33347 NA non-coding downstream 231235 41445529 ~ 41445742 (-)
G33531 NA non-coding upstream 84507 41952346 ~ 41993964 (-)
G33530 gabarapl2,LOC106587940 non-coding upstream 100485 41968324 ~ 41972454 (-)
G33549 NA non-coding upstream 129684 41997523 ~ 41998848 (-)
G33551 NA non-coding upstream 150934 42018773 ~ 42149451 (-)
G33553 rpl12,LOC107691034 non-coding upstream 166776 42034615 ~ 42038791 (-)
LOC120556513 NA other downstream 1013320 40661364 ~ 40663657 (-)
G33122 NA other downstream 1014356 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 1087313 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 1534929 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 2441231 39205275 ~ 39235746 (-)
G33711 NA other upstream 531452 42399291 ~ 42402136 (-)
G33796 NA other upstream 1117384 42985223 ~ 42990770 (-)
G33847 NA other upstream 1346795 43214634 ~ 43214987 (-)
G33914 NA other upstream 1584873 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 1898852 43766691 ~ 43813225 (-)

Expression


Co-expression Network