G33431


Basic Information

Item Value
gene id G33431
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 41758445 ~ 41810063 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU44390
attattttctccACATTAACTTCGAAACAACCTCATAAACCAAAGAGTAAGAAAGAGCATGCTCGGGCATGCAATGATGTCACAACATGATGATGCCACTGGGTGCGAAGTATAAAACATACAGTAGCAGAGAGTTTCTTTTTAATATCATTCATAAACTCGGGGACGTTTCGGTAATCCGCTGAGAGTTTAAAAGCTAGCGTTTTATTTTACACTGCTCTCCGTGTCTCACGTAGCCTTGTGTTGCTGGAATAAAAGAGAGACGAGAGGGAGAAACTCACAAACTGACACCAGATTGAGCAGGCTGAACAAACATGCTGAAAAAAATCTCATCCGGCCCAAAACGTGTCTGGAAATGACACCGTAGAAACCCCATTTTTCCCTTTTTGACTGGTCCAAAAGGGGGACgactgggagagagagaaaacagtgcATGCCATTTCAGGGTGAAAGGGaggatggatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgcgcgcgc
>TU44391
attattttctccACATTAACTTCGAAACAACCTCATAAACCAAAGAGTAAGAAAGAGCATGCTCGGGCATGCAATGATGTCACAACATGATGATGCCACTGGGTGCGAAGTATAAAACATACAGTAGCAGAGAGTTTCTTTTTAATATCATTCATAAACTCGGGGACGTTTCGGTAATCCGCTGAGAGTTTAAAAGCTAGCGTTTTATTTTACACTGCTCTCCGTGTCTCACGTAGCCTTGTGTTGCTGGAATAAAAGAGAGACGAGAGGGAGAAACTCACAAACTGACACCAGATTGAGCAGGCTGAACAAACATGCTGAAAAAAATCTCATCCGGCCCAAAACGTGTCTGGAAATGACACCGTAGAAACCCCATTTTTCCCTTTTTGACTGGTCCAAAAGGGGGACgactgggagagagagaaaacagtgcATGCCATTTCAGGGTGAAAGGGaggatggatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process
GO:0007417 central nervous system development biological_process
GO:0007420 brain development biological_process
GO:0030902 hindbrain development biological_process
GO:0060322 head development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44390 False 516 lncRNA 0.45 2 41789923 41810063
TU44391 True 531 lncRNA 0.44 2 41758445 41810063

Neighbor

gene id symbol gene type direction distance location
cdhr5a LOC104966020,LOC102208740,LOC102306030,LOC102082062,LOC107382057,LOC103155221 coding downstream 56770 41680273 ~ 41701675 (-)
ppip5k1a ppip5k1 coding downstream 258038 41453032 ~ 41500407 (-)
tp53bp1 tp53bp1,LOC104941490 coding downstream 365630 41361515 ~ 41392815 (-)
LOC120555591 cdkn2aip,LOC102799175,LOC108249214 coding downstream 413250 41342668 ~ 41345195 (-)
iqgap1 iqgap1 coding downstream 485086 41199741 ~ 41273359 (-)
LOC120555595 kiaa0895l,LOC105940675,LOC102205198 coding upstream 36196 41846259 ~ 41865163 (-)
LOC120556217 NA coding upstream 94706 41904769 ~ 41910826 (-)
LOC120556548 LOC104961102,LOC105919414,LOC102215897 coding upstream 190166 42000229 ~ 42017731 (-)
pole3 pole3 coding upstream 233126 42043189 ~ 42050360 (-)
herc1 herc1 coding upstream 455430 42265493 ~ 42341342 (-)
G33383 LOC103462981,LOC106924557,LOC102221671,LOC103155220 non-coding downstream 85583 41670400 ~ 41672862 (-)
G33371 znf408,LOC104941494 non-coding downstream 187209 41571002 ~ 41571236 (-)
G33369 NA non-coding downstream 192025 41566215 ~ 41566420 (-)
G33368 NA non-coding downstream 192970 41560832 ~ 41565475 (-)
G33347 NA non-coding downstream 312703 41445529 ~ 41445742 (-)
G33454 NA non-coding upstream 30260 41840323 ~ 41848807 (-)
G33455 NA non-coding upstream 34019 41844082 ~ 41863265 (-)
G33457 NA non-coding upstream 38005 41848068 ~ 41848640 (-)
G33531 NA non-coding upstream 142283 41952346 ~ 41993964 (-)
G33530 gabarapl2,LOC106587940 non-coding upstream 158261 41968324 ~ 41972454 (-)
LOC120556513 NA other downstream 1094788 40661364 ~ 40663657 (-)
G33122 NA other downstream 1095824 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 1168781 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 1616397 40049624 ~ 40142048 (-)
slc6a5 slc6a5 other downstream 2522699 39205275 ~ 39235746 (-)
G33711 NA other upstream 589228 42399291 ~ 42402136 (-)
G33796 NA other upstream 1175160 42985223 ~ 42990770 (-)
G33847 NA other upstream 1404571 43214634 ~ 43214987 (-)
G33914 NA other upstream 1642649 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 1956628 43766691 ~ 43813225 (-)

Expression


Co-expression Network