G33454


Basic Information

Item Value
gene id G33454
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 41840323 ~ 41848807 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU44420
gggaggaggaggaggaggaggaggaggaggaggggctcAGATCTGATTTCAGCAGCGTAGATTCCCCCCCCACTCCCCCGGGCTTTGTTGGGAGAAGTTTAATCCGTGCGTGTTTGTGTATGCTGCAAAATTGACATCTTGCTCCAGTATGGCTGTTGATGTGGAGGCAGACGTTTCTGCCACGAAAAGGTCACAAGTTGAGGTAACAAAGATTCTTCCTGATTGGACGAAAGAGGAACAAAGAAGGAAAACAGAACAATCGGAGATTAAACACTGATCATCTGATTTTATTATCGTAGCAATGTTGGGAGTGTGTTGCATTATACAGAGAGGTGTTCCTGTTTTTTAGTCTACCCTCATTAACaatggggtggacaaaataatagaaacacccCTCCGTATAATGTAACACCATTCTAACCGCATCACAAACTGTAGCCTTCAAAACGATAAACACAAACTGAACATCGTAACTTTCATGAAGGAGTgttgcattagttttagctagtACCAAACATACTGAGCGTATACGTTAAACACATTCAGTTTAAAACAAACGTGCTGTGTGCGTTACCTGCTCTCTGGTTATCATGTCGCATTGGAGCCGCTTATGGCCTTTGTGCCGTCTGTGTTGGCGTTTGCGTGTTCCTTCACCACAGGATCTGAGGGACAAACGCACATTTTATCTGACAAACTCCACCTGGTCTCAGCTGAAAGAAGAGCATGTCTTTGTCCTGGTGCCGGAAGTTAACTGGTAACGTGTGTTCAGCTGAAGTGTTTATACAGTTTGGTTTTAAGGTTTTATGCAGCACAATccataaaaagaagaaaacatacacaaaaaGATGGGTTATTATAGGGTTGATGTAACTTGTAAGGGTGTCAGAGTATTAATCGTCTctcatttaaatgcaaatgttgtgAATACTGAAAGATGATTCCTCACCTGCTCCGAAAACACTCTAACATATTAGTataagctttagtgcgtaattTTTGATAGTAATGaccatccgttacattcaagccatttgccaaatgagttgctacaaagctaattaaaactatcagctccacacaactctctctggatttctcagtaggactatgttcaggagattgtggcgtccggtgactttcccgcgcagaaactcaagtgaagataatgacctgaagagtcaatcatgtttttttaatcctccgtgtctccttggctactagcaactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgattataacAGAGAGATTatagaaggcttgtatcatgtggacgcgcccagttttgttgtcattacttagaattcctcatgggggagacagaaactacacactatagctttaagtcgGCTGCAATTCTTTTCACACCAAGAAGGTTTAAGAATGAAAGTAACCAGTTAATCGACTGAAATTCAGGCTCAAACTCTTTGATTCAATTTGACGAAATCACTATCTTGGCAGCTAAAAGGCAAAACCtgctatttttttaaactttcgtGAACTATTTATGAGGTCTTATAATAATCTGTAATAAACTGGTTACAGTAGTGAGAAAACAATTCAATATTTTTGACACATAAACCTAGCTTTAGCGGTGGCTCTGCCAGCCAGACGTGTGTAGGGGTGTGTACTAACAGAAGTAGGGGTGCTGCATGGCCTCGGCCGCCGTCAGCCTCTGCTGGTGGTCGTAGCGCAGCAGCTTGTCCAGCATGTCCAGAGCCTCTGGGCTCACCAGGTGCTGGTTCTCCGACTGGATGAACTGCTCCCAGCGCTTCCTCGTTTGCCTGGACACAGAAACATGTCACATGACTGAACTCACTCTTTACTTACTAGGACAGCGGGCCTGGGCTTCATCTGGGCGAtaaggagaaaatcaaatatcccaatattgttgaccaaatatCCCAATATCGACATTGTAGGGTTGacacaaaatatgcacacagtgagatgtttgataaataatcatcagttattTTGATATAATAACTGTgggggtaaaggcaaataatagaacagcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44420 True 2062 lncRNA 0.43 2 41840323 41848807

Neighbor

gene id symbol gene type direction distance location
cdhr5a LOC104966020,LOC102208740,LOC102306030,LOC102082062,LOC107382057,LOC103155221 coding downstream 138648 41680273 ~ 41701675 (-)
ppip5k1a ppip5k1 coding downstream 339916 41453032 ~ 41500407 (-)
tp53bp1 tp53bp1,LOC104941490 coding downstream 447508 41361515 ~ 41392815 (-)
LOC120555591 cdkn2aip,LOC102799175,LOC108249214 coding downstream 495128 41342668 ~ 41345195 (-)
iqgap1 iqgap1 coding downstream 566964 41199741 ~ 41273359 (-)
LOC120556217 NA coding upstream 55962 41904769 ~ 41910826 (-)
LOC120556548 LOC104961102,LOC105919414,LOC102215897 coding upstream 151422 42000229 ~ 42017731 (-)
pole3 pole3 coding upstream 194382 42043189 ~ 42050360 (-)
herc1 herc1 coding upstream 416686 42265493 ~ 42341342 (-)
dapk2a LOC104966057,LOC103365817 coding upstream 500889 42349696 ~ 42363832 (-)
G33431 NA non-coding downstream 30260 41758445 ~ 41810063 (-)
G33432 NA non-coding downstream 48352 41767166 ~ 41791971 (-)
G33383 LOC103462981,LOC106924557,LOC102221671,LOC103155220 non-coding downstream 167461 41670400 ~ 41672862 (-)
G33371 znf408,LOC104941494 non-coding downstream 269087 41571002 ~ 41571236 (-)
G33369 NA non-coding downstream 273903 41566215 ~ 41566420 (-)
G33531 NA non-coding upstream 103539 41952346 ~ 41993964 (-)
G33530 gabarapl2,LOC106587940 non-coding upstream 119517 41968324 ~ 41972454 (-)
G33549 NA non-coding upstream 148716 41997523 ~ 41998848 (-)
G33551 NA non-coding upstream 169966 42018773 ~ 42149451 (-)
G33553 rpl12,LOC107691034 non-coding upstream 185808 42034615 ~ 42038791 (-)
sirt3 sirt3 other downstream 75427 41757627 ~ 41764896 (-)
LOC120556513 NA other downstream 1176666 40661364 ~ 40663657 (-)
G33122 NA other downstream 1177702 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 1250659 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 1698275 40049624 ~ 40142048 (-)
G33711 NA other upstream 550484 42399291 ~ 42402136 (-)
G33796 NA other upstream 1136416 42985223 ~ 42990770 (-)
G33847 NA other upstream 1365827 43214634 ~ 43214987 (-)
G33914 NA other upstream 1603905 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 1917884 43766691 ~ 43813225 (-)

Expression


Co-expression Network