G33689


Basic Information

Item Value
gene id G33689
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 42210287 ~ 42228769 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU44728
cgggcattattagtggggtcatttacgagatacatcactggatccattagcccctgcgctaagctattcagctgataacgctactctacgctaactctcccaatgttcgacccaggtgaaaaaagcttctgggggggtgtttggctcgaggtcacggtgcaaaggaccctagggtgaattactccgaaccatcactttaagcaaaCCTCACGGTAAAAAGAGAAGGTTTATGATGGGagtacaaaaaatgttcttGCGTGAGGCCCCATTATGCATCTCATGTCCACTGCTGATTCACATTTCTGTTGTAATCCTGACAGCTTTGACTATTCTGAAGCTCACATGTGCTTGTTGTACCTGAACTGTGTTGTGCAGACCCTCCAAGATCCTGAAAAATCAATCAATCGGGCAATAGATCATGTGTGTTTCCAGCTTTGGGACCAGTTTCCAGGACACAGATTGGTCCGGGACTGAAGTGGCCATCTATAAACCAGTCTGCCCTCAGTGTTTAGCTTGAAGAACTTGACTTAGCACCAGTGTTAATCCTTTACTTTTGAGAAAAACCTCATCCTCAGGTGGTGGATTACTTCCTGTGTGACTACAGCAGTACCTCAAACGCCCCGCTGTTGCTGCTGCGAAGTACAAAATGATGTCACAAAACCAATGAGACACGTAAACTATCACTGTACAAAATACATTccatattttacagtttttgttttccttctgCTTGTGCCTTTCCGACGGCTGGTGATGATGCGTGTGGACGCAGCGGTTACTGGATGCCTCTGAACAAACACATGGCAAACACCATGGCGAAGAGCTGCAGAGAGACACGGGACACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44728 True 846 lncRNA 0.46 2 42210287 42228769

Neighbor

gene id symbol gene type direction distance location
pole3 pole3 coding downstream 159927 42043189 ~ 42050360 (-)
LOC120556548 LOC104961102,LOC105919414,LOC102215897 coding downstream 192556 42000229 ~ 42017731 (-)
LOC120556217 NA coding downstream 299461 41904769 ~ 41910826 (-)
LOC120555595 kiaa0895l,LOC105940675,LOC102205198 coding downstream 345124 41846259 ~ 41865163 (-)
cdhr5a LOC104966020,LOC102208740,LOC102306030,LOC102082062,LOC107382057,LOC103155221 coding downstream 508612 41680273 ~ 41701675 (-)
herc1 herc1 coding upstream 36724 42265493 ~ 42341342 (-)
dapk2a LOC104966057,LOC103365817 coding upstream 120927 42349696 ~ 42363832 (-)
LOC120556187 LOC103365825,LOC103378970 coding upstream 178654 42407423 ~ 42590136 (-)
tipin NA coding upstream 390123 42618892 ~ 42629084 (-)
lctla LOC104947911,LOC103368870,LOC100693012,LOC101473106,LOC102204643 coding upstream 401455 42630224 ~ 42643898 (-)
G33551 NA non-coding downstream 60836 42018773 ~ 42149451 (-)
G33569 NA non-coding downstream 70433 42105398 ~ 42139854 (-)
G33568 NA non-coding downstream 94826 42097785 ~ 42115461 (-)
G33553 rpl12,LOC107691034 non-coding downstream 171496 42034615 ~ 42038791 (-)
G33549 NA non-coding downstream 211439 41997523 ~ 41998848 (-)
G33735 NA non-coding upstream 386855 42615624 ~ 42617367 (-)
G33740 NA non-coding upstream 433854 42662623 ~ 42691804 (-)
G33753 NA non-coding upstream 525686 42754455 ~ 42756824 (-)
G33759 NA non-coding upstream 590039 42818808 ~ 42911206 (-)
G33763 NA non-coding upstream 641092 42869861 ~ 42897814 (-)
sirt3 sirt3 other downstream 445391 41757627 ~ 41764896 (-)
LOC120556513 NA other downstream 1546630 40661364 ~ 40663657 (-)
G33122 NA other downstream 1547666 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 1620623 40564241 ~ 40589664 (-)
LOC120556511 LOC102208128,LOC101468289 other downstream 2068239 40049624 ~ 40142048 (-)
G33711 NA other upstream 170522 42399291 ~ 42402136 (-)
G33796 NA other upstream 756454 42985223 ~ 42990770 (-)
G33847 NA other upstream 985865 43214634 ~ 43214987 (-)
G33914 NA other upstream 1223943 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 1537922 43766691 ~ 43813225 (-)

Expression


Co-expression Network