G33735


Basic Information

Item Value
gene id G33735
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 42615624 ~ 42617367 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU44802
AGGTTTAATTGACAAACCACAAACACTCAACCATCTTACAAAAATAGATTCTGTGATGACACTTTAATACAAAGACTCATAACCTGCAATAATAAAACTAACAATTACATTACAAGTCAATAAACCTGAGTGACTAGCACAGATTTCCGGATTAAGAACATAGTGGGTTTACACTGAAAACTGAAAATTACTTTCAAAAAATTTCACTAAAAGAAGATTTATGAGCATGTTGTTGAACATTAGTCCGTCAATTCAGTAAAAATCCAAAAATTCAATTcagtaaaaaatgtaaaactaatTGTGTGCGGTGCCCCGAGCCATTTTTTTTAGACCCCggcttttatttgaggaaatacgGTAACTCATCTTTGGACCAACATACTGAAAATGTCCACAGAGTCAGCATATTTCTCCTAATTTAATATCATCAGAGAACATATTTACACTTTGCATTATCTATAATTTTTCCTTGAGATGATAAAAAAGataataaataactacaaagcTGCCGTCATGATTCAAACGATGCTTAAGAAATGTAACTGTTAAACTGTGAAAGAGAAAGCTTTAGGCTGTTCTGATAGTTGTAGATTGTAGATGATTGTTTTATGGAAATATGTCATGTTTAAAAACCCAGCAGGTTCTTCAGTGTCCAGCAGAGTGCATGTTGCAGcggttcccacatttctaagaattttatTTCACTCAAAATTAGGCCcgatgttcccacatttctaagattttctttttcaaaattaggccctatgttcccacatttctaagaattctTTTTCACTTAAAATTAGGCCATATGTTCCCACATCTAAGATTttgtttccaaaattaggccctatgttcccatgtttctaagatttttttccaaaattaggccctatgttcccacatttcctttttcatgaatttgtatcagatttgatccctctttctcccaatttggtagccagttacacccaacctattatctaGTAGCAtcggactacagatggaatgtaagcctaaccctaacatagggcctaattttgaaaaaaatctattgggctgtgggaccatagggctttgggaccattgggctgtgggaccatagggctgtgggaacatagggctgtgggaccatagggctgtgggaacatagggctgtgggaccatagggctgtgggaacatagggctgtgggaccatagggctgtgggaccatagggctgtgggaacatagggctgtgggaacatagggctgaccacTTTGCAGCCGCTCTATGCTGTTGTTGCACAGACGTGTGCGGCCATGTCAAGGTCCAGCAGAGCCAGCTCTCTGATCTCCTCCAGGAGAGAGTACAGATTGGGAGTTTTGCTCTGGCTgaactctctctcctctctggagAGTTTGGGCCGCCGGGCCGCCTTCTCCTGAGCCTGCTGGGACGCCTCCTCGGCCAGGCGCACCACCTCCTGGACCAGCTGGCAGCGGCCCTGCGAGGGGGGCTGCTGGGGCTCGGCGCTGCGGTGGGGCTTGTTGCTGATGACCTCCAGGTTGAGACTGTCTGCGTGGCA
>TU44803
AGGTTTAATTGACAAACCACAAACACTCAACCATCTTACAAAAATAGATTCTGTGATGACACTTTAATACAAAGACTCATAACCTGCAATAATAAAACTAACAATTACATTACAAGTCAATAAACCTGAGTGACTAGCACAGATTTCCGGATTAAGAACATAGTGGGTTTACACTGAAAACTGAAAATTACTTTCAAAAAATTTCACTAAAAGAAGATTTATGAGCATGTTGTTGAACATTAGTCCGTCAATTCAGTAAAAATCCAAAAATTCAATTcagtaaaaaatgtaaaactaatTGTGTGCGGTGCCCCGAGCCATTTTTTTTAGACCCCggcttttatttgaggaaatacgGTAACTCATCTTTGGACCAACATACTGAAAATGTCCACAGAGTCAGCATATTTCTCCTAATTTAATATCATCAGAGAACATATTTACACTTTGCATTATCTATAATTTTTCCTTGAGATGATAAAAAAGataataaataactacaaagcTGCCGTCATGATTCAAACGATGCTTAAGAAATGTAACTGTTAAACTGTGAAAGAGAAAGCTTTAGGCTGTTCTGATAGTTGTAGATTGTAGATGATTGTTTTATGGAAATATGTCATGTTTAAAAACCCAGCAGGTTCTTCAGTGTCCAGCAGAGTGCATGTTGCAGcggttcccacatttctaagaattttatTTCACTCAAAATTAGGCCcgatgttcccacatttctaagattttctttttcaaaattaggccctatgttcccacatttctaagaattctTTTTCACTTAAAATTAGGCCATATGTTCCCACATCTAAGATTttgtttccaaaattaggccctatgttcccatgtttctaagatttttttccaaaattaggccctatgttcccacatttcctttttcatgaatttgtatcagatttgatccctctttctcccaatttggtagccagttacacccaacctattatctaGTAGCAtcggactacagatggaatgtaagcctaaccctaacatagggcctaattttgaaaaaaatctattgggctgtgggaccatagggctgtgggaccatagggctgtgggaacatagggctgtgggaccatagggctgtgggaccatagggctgtgggaacatagggctgtgggaacatagggctgaccacTTTGCAGCCGCTCTATGCTGTTGTTGCACAGACGTGTGCGGCCATGTCAAGGTCCAGCAGAGCCAGCTCTCTGATCTCCTCCAGGAGAGAGTACAGATTGGGAGTTTTGCTCTGGCTgaactctctctcctctctggagAGTTTGGGCCGCCGGGCCGCCTTCTCCTGAGCCTGCTGGGACGCCTCCTCGGCCAGGCGCACCACCTCCTGGACCAGCTGGCAGCGGCCCTGCGAGGGGGGCTGCTGGGGCTCGGCGCTGCGGTGGGGCTTGTTGCTGATGACCTCCAGGTTGAGACTGTCTGCGTGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44802 True 1568 lncRNA 0.43 2 42615624 42617367
TU44803 False 1488 lncRNA 0.42 2 42615624 42617367

Neighbor

gene id symbol gene type direction distance location
LOC120556187 LOC103365825,LOC103378970 coding downstream 25488 42407423 ~ 42590136 (-)
dapk2a LOC104966057,LOC103365817 coding downstream 251792 42349696 ~ 42363832 (-)
herc1 herc1 coding downstream 274282 42265493 ~ 42341342 (-)
pole3 pole3 coding downstream 565264 42043189 ~ 42050360 (-)
LOC120556548 LOC104961102,LOC105919414,LOC102215897 coding downstream 597893 42000229 ~ 42017731 (-)
tipin NA coding upstream 1525 42618892 ~ 42629084 (-)
lctla LOC104947911,LOC103368870,LOC100693012,LOC101473106,LOC102204643 coding upstream 12857 42630224 ~ 42643898 (-)
LOC120555681 ccnb2,LOC103368869,LOC100692470 coding upstream 40665 42658032 ~ 42661872 (-)
cars1 cars coding upstream 46838 42664205 ~ 42687905 (-)
arfgap2 arfgap2 coding upstream 86833 42704200 ~ 42722874 (-)
G33689 NA non-coding downstream 386855 42210287 ~ 42228769 (-)
G33690 NA non-coding downstream 401527 42211568 ~ 42214097 (-)
G33551 NA non-coding downstream 466173 42018773 ~ 42149451 (-)
G33569 NA non-coding downstream 475770 42105398 ~ 42139854 (-)
G33568 NA non-coding downstream 500163 42097785 ~ 42115461 (-)
G33740 NA non-coding upstream 45256 42662623 ~ 42691804 (-)
G33753 NA non-coding upstream 137088 42754455 ~ 42756824 (-)
G33759 NA non-coding upstream 201441 42818808 ~ 42911206 (-)
G33763 NA non-coding upstream 252494 42869861 ~ 42897814 (-)
G33793 NA non-coding upstream 353082 42970449 ~ 42972764 (-)
G33711 NA other downstream 213488 42399291 ~ 42402136 (-)
sirt3 sirt3 other downstream 850728 41757627 ~ 41764896 (-)
LOC120556513 NA other downstream 1951967 40661364 ~ 40663657 (-)
G33122 NA other downstream 1953003 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 2025960 40564241 ~ 40589664 (-)
G33796 NA other upstream 367856 42985223 ~ 42990770 (-)
G33847 NA other upstream 597267 43214634 ~ 43214987 (-)
G33914 NA other upstream 835345 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 1149324 43766691 ~ 43813225 (-)
G34078 NA other upstream 1422993 44040360 ~ 44089691 (-)

Expression


Co-expression Network