G33740


Basic Information

Item Value
gene id G33740
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 42662623 ~ 42691804 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU44809
cagttgctagtagccaaggaggacatggaggattaaaaaacatgatggactcttcagaagaggtcattatcttcacttgagtttctgtgcgggaaagtcaccggacgccacaatcttctgaacatagtcttaattagctttgtagcaactcatttggcaatggcttgaatgtaacgggcgtttattaatatcaaaaagttatgcactgtagctttaaaataTTAAACACAAGTTAAATACCTGCAGGATATTGGGATACATCCAACAGCTGGTCACTGCAGTTGTTATCAAACATTACTCGAACGGAAAGAGTGAAATTGTTGGGAACTATTTTCGGCGGCGGATTAATTCCACATTCCATAAGATGGAGCTCTATGCCACAGAGGAATAAGATATATCAGACACAGAGCAATACATTGTTTGTTGtgatctttttttggggggggatttTATGGCAATGAGAAAAATATGGAATATCACCAGACTTATTTTAAGTGCATCTGTTTACTCATCATCCTAGGAAAATATAACTTCTTCATCCCTCTGCTGTGGCTTGAGTGAAACCACATGAAAAGGAGCTTTTTATTATTCAACCGTCCATTAGGATCATGTctttttgtactgtatgtgtattacAATTAAATGGTTAAGTGAAGGCATAGCTGCAGTGATTCTTTCAGATAGGAAGATGCTTAAATAAAGAGGCAGTAAGCACAATAAAATTGGTCATCCTTGTGAACTCTTGAGATTCATCCTAAACTGCCTAGATAATGTCATGAATACAAGATACATAACAGTGTGAATGGTTGTTTGTAACTCAAATAAAAGACATCCAGACGGGGACAGAATTTGATTAcaaactcttattttgaaattctgtgtgtctgttgtccAAACGGAAAGAATAGAGTGAGTTAGGGCAGGGgccttcaacattttttaaaccaagggaCGGAGcaggaccccctactacatatattgtataaaattaagttgcatattaaactgggcccacaataaagtgtagggcagcctaaagcctttattcatacctttttttg

Function

GO: NA

KEGG:

id description
ko00190 Oxidative phosphorylation
ko05012 Parkinson disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU44809 True 1061 lncRNA 0.38 2 42662623 42691804

Neighbor

gene id symbol gene type direction distance location
LOC120555681 ccnb2,LOC103368869,LOC100692470 coding downstream 751 42658032 ~ 42661872 (-)
lctla LOC104947911,LOC103368870,LOC100693012,LOC101473106,LOC102204643 coding downstream 18725 42630224 ~ 42643898 (-)
tipin NA coding downstream 33539 42618892 ~ 42629084 (-)
LOC120556187 LOC103365825,LOC103378970 coding downstream 72487 42407423 ~ 42590136 (-)
dapk2a LOC104966057,LOC103365817 coding downstream 298791 42349696 ~ 42363832 (-)
arfgap2 arfgap2 coding upstream 12396 42704200 ~ 42722874 (-)
LOC120556519 shank2,LOC102783952 coding upstream 325917 43017721 ~ 43305187 (-)
si:ch211-220f16.2 NA coding upstream 646850 43338654 ~ 43390335 (-)
LOC120555429 LOC104938483 coding upstream 704621 43396425 ~ 43400445 (-)
LOC120555495 LOC104938484,LOC103359668,LOC102209123,LOC101072180 coding upstream 711734 43403538 ~ 43407721 (-)
G33735 NA non-coding downstream 45256 42615624 ~ 42617367 (-)
G33689 NA non-coding downstream 433854 42210287 ~ 42228769 (-)
G33690 NA non-coding downstream 448526 42211568 ~ 42214097 (-)
G33551 NA non-coding downstream 513172 42018773 ~ 42149451 (-)
G33753 NA non-coding upstream 62651 42754455 ~ 42756824 (-)
G33759 NA non-coding upstream 127004 42818808 ~ 42911206 (-)
G33763 NA non-coding upstream 178057 42869861 ~ 42897814 (-)
G33793 NA non-coding upstream 278645 42970449 ~ 42972764 (-)
G33795 LOC102788308 non-coding upstream 286056 42977860 ~ 42979393 (-)
G33711 NA other downstream 260487 42399291 ~ 42402136 (-)
sirt3 sirt3 other downstream 897727 41757627 ~ 41764896 (-)
LOC120556513 NA other downstream 1998966 40661364 ~ 40663657 (-)
G33122 NA other downstream 2000002 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 2072959 40564241 ~ 40589664 (-)
G33796 NA other upstream 293419 42985223 ~ 42990770 (-)
G33847 NA other upstream 522830 43214634 ~ 43214987 (-)
G33914 NA other upstream 760908 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 1074887 43766691 ~ 43813225 (-)
G34078 NA other upstream 1348556 44040360 ~ 44089691 (-)

Expression


Co-expression Network