G33753


Basic Information

Item Value
gene id G33753
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 42754455 ~ 42756824 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU44828
CAAGAATTCAAACAGAATTTTGATTTAATTTCCCCTTTTATTGCAAATAAAATTCCAtttatgacaaaaaaatataatttcaccGTTACATATATTGCTCTATATTTATCTGTTAAAAGTTTCAAACTGTCAGTGGACATTTTCAAAGTTACACATTCATCTCATGAATGTACAGATGTAACATATTTGAatacatgttttgtatttttaaggCAAAGTCGAGAAGCAAATGTAACCCAAAAGGGTCTCCCCACCAACATATTTTGAAACACAGGATTTAAAGCGGATATCTTTCAGTAAATGGACTAACTCTAAGCAACAACTAAATCAATTTTGGTCAAGATAGACAACACGTTCCATATTTGTATGATATGGTACGAAAACTTATGCACACCAATTTGTATATGCTACTAAATTAGGTGACAGCTGGTCGGTCACATGATGCCTGATCACATGATGCCTGGGCCATGTTCAGCCCCGAGAAAACCTAGCAAcacgttttttaaactgaaatggGCGTGCGTTAACacgtttacagacacgtctcgatgattgtggtttgggttaaaagaCCCCTTAAGCAGTACTATCAGCACACAAATACCTGGGTGTTTTCTGGGTGAAATtcttattttttccttaaactTTTCCAACCTCCTCCTTAGGTGGATCTTCTCTGCTCTTATAAAgcggcagtcaatgtggtgcttacagtaataaatatgtggaatatataccaattattatttatttttattattagcaTTATTTTTCgtacaaatggttcatgagGACAGCCTGAGTTAACAATTGTTTAGATGAGGAATGTTTAAAACAGAGGTTAAACATGTCTACACAGGACAAATAAAATTGTAATACAGCTATAAATTTAACTCTTcaattacataaataaatacacctgtattttatttggttgaaatgacaatgaTAATTGGGTCCTTAACaagccaaataaaaaaatcccaaattTGCACATCAAGTATTACTGTATCAACTGTTACTATTTCTGTACTTGCTTAACCACACAGACTATCATCAGCTGAAGTTAAATGCCGGGAAACGTTCTGCAAGAAGTTAACAACAGAACAGTGGCATCGAAAAAAATCCTGCAAAACCAGACGttttgcaattttgtaattttgacatttgaaatattttttacttCTGGAGAGTGAGCTGCAGGCGGGGGCGTGATTGGTTCCTAGCCATGGGGCAAACAACCATAATAGAAATCAAAACCAGAAGGCTGCAGGTGGGGGGCATTGATTGAGATCATTTTTTATGGCTTGTGCCTTTATTTGGCAGTAGACAGTATAGAGGGACCAGAAACTTCGTCCAAACACTTTTATCAACTTCAGAAGCATAACTCTTTGAAGGATAGGTTCCCAATTTTTCAAATATGTCTTAAAACAATAGTCATGTGTTGATATGAACATTGAAACAAGGTGTTGCTTAATGTAATAATTCCTTCCGTTCATTCTGGCCAGTCGAGTAAGAAAACCCTTTCTAAGGCTGTTGAATAAATCAGTTGAGTATCTTAGTATCTAAGTTATTGTattgtaaagctattttagtgcaaAGTGTGCAGTCCACtgcatatgcatatatatatatacatacatactggaCTTGTGGACTTTGTTCCCTATCTCTTCAATTGAAAAAATGTTAGGGATCTATTCAGTGGCCAGTGTGATCAGGAGGGATGATGAATGAATGTACATTTGGGCAGAGGTTGTCAATCTTTTTTTAACCAAGGATGGGGGCTACCCTCATGTATGTCCCTTGGAATATTTTGAGGGTATTATTTACACTGCTATAGTGTTAATTACGTGAAAGAACAACACAAtagaaatgtatttgaaagctaTTCGACATGTAttacagatttttttgtgtAGCGCAAGTTATAGATTTGTTAGATTAGGAAGTAATCTATGAACTATTATAGATTTAAAGGCAGACCCAGTTTGAGAATCACTGCATGAGTATTGTTTTAAGAATCTGAACCTATCCTTTACCAAAATATAACTTAAAACATACATGCTGTGTAAAACAGCACGGTATTAAATGAGTTGGGTTTTAGTTCTCCCAGCCGGAACCTAAGAGAGATTTTTGGTCGTCTGCTTTTCTCTTCCTCATGAAGTAATGAACCAGCACAGCCATCAACACCAGTGCTACTGAGAAGATGCAGCCAAAGACCACGGTGCTGATGTTGGTGTTGAGGATCTGCTTGATTCCCCAATCTCCTCCGCTGGAGACTGTAGGAGCAAAGTCCCGACGTCCTCCGCTTGATTTGGTGTCTGGAGAAACTGGTGGAGGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44828 True 2346 lncRNA 0.37 2 42754455 42756824

Neighbor

gene id symbol gene type direction distance location
arfgap2 arfgap2 coding downstream 31581 42704200 ~ 42722874 (-)
cars1 cars coding downstream 66550 42664205 ~ 42687905 (-)
LOC120555681 ccnb2,LOC103368869,LOC100692470 coding downstream 92583 42658032 ~ 42661872 (-)
lctla LOC104947911,LOC103368870,LOC100693012,LOC101473106,LOC102204643 coding downstream 110557 42630224 ~ 42643898 (-)
tipin NA coding downstream 125371 42618892 ~ 42629084 (-)
LOC120556519 shank2,LOC102783952 coding upstream 260897 43017721 ~ 43305187 (-)
si:ch211-220f16.2 NA coding upstream 581830 43338654 ~ 43390335 (-)
LOC120555429 LOC104938483 coding upstream 639601 43396425 ~ 43400445 (-)
LOC120555495 LOC104938484,LOC103359668,LOC102209123,LOC101072180 coding upstream 646714 43403538 ~ 43407721 (-)
LOC120555411 NA coding upstream 660499 43417323 ~ 43429155 (-)
G33740 NA non-coding downstream 62651 42662623 ~ 42691804 (-)
G33735 NA non-coding downstream 137088 42615624 ~ 42617367 (-)
G33689 NA non-coding downstream 525686 42210287 ~ 42228769 (-)
G33690 NA non-coding downstream 540358 42211568 ~ 42214097 (-)
G33569 NA non-coding downstream 614601 42105398 ~ 42139854 (-)
G33759 NA non-coding upstream 61984 42818808 ~ 42911206 (-)
G33763 NA non-coding upstream 113037 42869861 ~ 42897814 (-)
G33793 NA non-coding upstream 213625 42970449 ~ 42972764 (-)
G33795 LOC102788308 non-coding upstream 221036 42977860 ~ 42979393 (-)
G33804 NA non-coding upstream 238792 42995616 ~ 42998113 (-)
G33711 NA other downstream 352319 42399291 ~ 42402136 (-)
sirt3 sirt3 other downstream 989559 41757627 ~ 41764896 (-)
LOC120556513 NA other downstream 2090798 40661364 ~ 40663657 (-)
G33122 NA other downstream 2091834 40648676 ~ 40662621 (-)
LOC120556146 NA other downstream 2164791 40564241 ~ 40589664 (-)
G33796 NA other upstream 228399 42985223 ~ 42990770 (-)
G33847 NA other upstream 457810 43214634 ~ 43214987 (-)
G33914 NA other upstream 695888 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 1009867 43766691 ~ 43813225 (-)
G34078 NA other upstream 1283536 44040360 ~ 44089691 (-)

Expression


Co-expression Network