G33875


Basic Information

Item Value
gene id G33875
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 43336810 ~ 43337787 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU44993
agtagaatggacatttctaagtgaccccaaacttttgaccggtagtgtatatctGTACATTTTACTTCGGTGTGATGGTGTGCCAAAATGtactgcaaaaaaaagaaagaaaagcagatGATATGaaagtacatactgtatgtgtatttaAGGTTTATAGTATTTATGTGTGCATCCTCGGAAAGTATGctgactgtatgtatgtatatatgcatttCTATCCTCTTAGCCTGATGTTTGATGACTGTACATTTCTTCTCGATTGTTGAGAGTCTAAAAAAGTGTGATCGATAAAAGACGGGAGTTTCACAAAAGGAGGTCAATTAACAAGCCAAAAAATAAATGGAACAAATGAACTCCAGTGATTTTACAGACAAGATGAAACCTAACAAACGGTGAAAGATGTTTTCTGGCTTGTTAGTTGATCCAGTTTTGTAGAACTACGCGGCTGCTGATGAATTTGAGGTACACTGTTCTTATGATCTGTACATAGAGGTGTGATTTAATGGACAAAACAATGAACTGAGTCTATTTATGAAAAAGGTTAACTACTGAAAAAAATGTTCAGATGGCATATTTTCTCTACTGCCTCTATTTTTAAGAGATAGTGACGCTGTTGGCCTTTTGGTGACATTAGGCTTAACTTGGTGCAATACTGTGTCAGAGGTGACCTTTGTCAGATTAATTTAATAAAGCTTGat
>TU44994
tatgtgcttacataattgcaaaagggttctcgactgttgtagaaagaagtggctgatctttaatgcaatatctccATTggccattatcagcaaccattcatccaacgttccaaaaggcccattctgtttactaatctgatatcattttaaaaggctaactgagaaaacattggagaacccttttgcaattatgtaagcacataatgtaatctgaaaactgctctcctggttaaaaaaacaatgcaactgatctcagctggtattctgtctgtaatggagtagaatggacatttctaagtgaccccaaacttttgaccggtagtgtatatctGTACATTTTACTTCGGTGTGATGGTGTGCCAAAATGtactgcaaaaaaaagaaagaaaagcagatGATATGaaagtacatactgtatgtgtatttaAGGTTTATAGTATTTATGTGTGCATCCTCGGAAAGTATGctgactgtatgtatgtatatatgcatttCTATCCTCTTAGCCTGATGTTTGATGACTGTACATTTCTTCTCGATTGTTGAGAGTCTAAAAAAGTGTGATCGATAAAAGACGGGAGTTTCACAAAAGGAGGTCAATTAACAAGCCAAAAAATAAATGGAACAAATGAACTCCAGTGATTTTACAGACAAGATGAAACCTAACAAACGGTGAAAGATGTTTTCTGGCTTGTTAGTTGATCCAGTTTTGTAGAACTACGCGGCTGCTGATGAATTTGAGGTACACTGTTCTTATGATCTGTACATAGAGGTGTGATTTAATGGACAAAACAATGAACTGAGTCTATTTATGAAAAAGGTTAACTACTGAAAAAAATGTTCAGATGGCATATTTTCTCTACTGCCTCTATTTTTAAGAGATAGTGACGCTGTTGGCCTTTTGGTGACATTAGGCTTAACTTGGTGCAATACTGTGTCAGAGGTGACCTTTGTCAGATTAATTTAATAAAGCTTGat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU44993 False 701 lncRNA 0.36 1 43336810 43337510
TU44994 True 978 lncRNA 0.36 1 43336810 43337787

Neighbor

gene id symbol gene type direction distance location
LOC120556519 shank2,LOC102783952 coding downstream 31623 43017721 ~ 43305187 (-)
arfgap2 arfgap2 coding downstream 613936 42704200 ~ 42722874 (-)
cars1 cars coding downstream 648905 42664205 ~ 42687905 (-)
LOC120555681 ccnb2,LOC103368869,LOC100692470 coding downstream 674938 42658032 ~ 42661872 (-)
lctla LOC104947911,LOC103368870,LOC100693012,LOC101473106,LOC102204643 coding downstream 692912 42630224 ~ 42643898 (-)
si:ch211-220f16.2 NA coding upstream 867 43338654 ~ 43390335 (-)
LOC120555429 LOC104938483 coding upstream 58638 43396425 ~ 43400445 (-)
LOC120555495 LOC104938484,LOC103359668,LOC102209123,LOC101072180 coding upstream 65751 43403538 ~ 43407721 (-)
LOC120555411 NA coding upstream 79536 43417323 ~ 43429155 (-)
LOC120556173 NA coding upstream 96528 43434315 ~ 43437103 (-)
G33857 NA non-coding downstream 775 43335819 ~ 43336035 (-)
G33854 NA non-coding downstream 7718 43328552 ~ 43329092 (-)
G33853 NA non-coding downstream 18632 43317845 ~ 43318178 (-)
G33845 NA non-coding downstream 159621 43176385 ~ 43177189 (-)
G33820 NA non-coding downstream 268738 43067779 ~ 43068072 (-)
G33885 NA non-coding upstream 72857 43410644 ~ 43411414 (-)
G33886 NA non-coding upstream 74848 43412635 ~ 43413282 (-)
G33918 NA non-coding upstream 151934 43489721 ~ 43489925 (-)
G33960 NA non-coding upstream 181166 43518953 ~ 43519895 (-)
G33976 NA non-coding upstream 293772 43631559 ~ 43631854 (-)
G33847 NA other downstream 121823 43214634 ~ 43214987 (-)
G33796 NA other downstream 346040 42985223 ~ 42990770 (-)
G33711 NA other downstream 934674 42399291 ~ 42402136 (-)
sirt3 sirt3 other downstream 1571914 41757627 ~ 41764896 (-)
LOC120556513 NA other downstream 2673153 40661364 ~ 40663657 (-)
G33914 NA other upstream 114925 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 428904 43766691 ~ 43813225 (-)
G34078 NA other upstream 702573 44040360 ~ 44089691 (-)
LOC120556527 LOC102787635,LOC101476187,LOC100691227,LOC106610718 other upstream 1454195 44791982 ~ 44915666 (-)
G34518 NA other upstream 1800869 45138656 ~ 45271013 (-)

Expression


Co-expression Network