G34255


Basic Information

Item Value
gene id G34255
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 44738480 ~ 44740122 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU45541
TTGactcaatgaaataaaaactgaacgaAGAGACGTAAAGTGTCAATGTTTTATTCTTGAAGTTAAAATATAATGTGATTTCtgtacatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcaccctgACTCATTTACATTGACGTTGCCAGGaatacacatgcacgcacaggcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccactgcagCTGTAAACACTGTACACACTcgattaaccctctgaggtttTGGTCATTTACATCGccacgttttggtttttaagcgttttgagttttgagccaaaagtgatGACCGTGCACCGACATCCCGGTATACTGGGcgtaaacaggaggcagcgtggagactccgccccctgctggtagttacCATGGTAACGTTACGAGCTttaagtctcagagaacgagtgGTCGTGACCGATGAGAACCAATCAGGACGGAGAAACATTGGCGTcagttgagactgcaacacaacccgcAGATTACCAAACCACAaagggtcagaagtgtttccaaatgtctccggtttaggggacTCAGacacgccagagcagggggaatgagacggggaaacgccagagaagggggaatgagagggggaaacaccagagcagggggaatgagacgGGGAAACGCCAGAGAAGGGGGaacgagagggggaaacaccagaacaGGGGGAATGAGACGGGGAAACGCCAGAGAAGGGGGAacgagagggggaaacgccagagcagggggaatgagaggggggaatgccagagcagggggaacgagagggggaaacgccagagcaggaggaatgagagggggaaacgtagcagacgaaattcctttttaaaccaaaacgtagcggtgTAAATGGAGCCTCAATCTTGACCCAAAACGACCTTTTTTAGAAGCATTTGCGTTGGGTTCAGGTCTGGTTTTCTCTTTCAGGTTTGGTCTGGTTGGGTCCAACTTTTCACACTTTACAGAAGATTTTGTTTCCTCGATAAAACAGTCGCACGCACATGAACACATCGGCACTGTTGGCATAGCAACAAAGCACAGTAATACCCCCGTGGACCGTCGAAAGATGACTGAATCTGCAAGCGCCTCTCAGACagttttttctcattttaaagaGTTTATCTGGTTAAAGAAGAGTCCTGGTTGTAGAGAGGAGGTTAAACTCGCCCCTCAGTCCTCctgattttcttcttctctcattCTTTTCAGCGTCTCTTCCCGTCTTTCTCCCAGTTGGTGTGGAGCAGCGCCGGGTCTCTGCTCGTCAGCCTCCAAAATGGCTTCCAGATAAAGTTCAGCTTGTGTTGTGATCAGGCCATCAGGACACCTGCAggcaggagacagaaagagggtgGAGTCAGTAGTTAGCACAATGCTAAcgtcttttaaactgaccgttAAAAATACCGTAAAAT
>TU45542
TTGactcaatgaaataaaaactgaacgaAGAGACGTAAAGTGTCAATGTTTTATTCTTGAAGTTAAAATATAATGTGATTTCtgtacatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcaccctgACTCATTTACATTGACGTTGCCAGGaatacacatgcacgcacaggcacacacacacacacacacacacacacaccactgcagCTGTAAACACTGTACACACTcgattaaccctctgaggtttTGGTCATTTACATCGccacgttttggtttttaagcgttttgagttttgagccaaaagtgatGACCGTGCACCGACATCCCGGTATACTGGGcgtaaacaggaggcagcgtggagactccgccccctgctggtagttacCATGGTAACGTTACGAGCTttaagtctcagagaacgagtgGTCGTGACCGATGAGAACCAATCAGGACGGAGAAACATTGGCGTcagttgagactgcaacacaacccgcAGATTACCAAACCACAaagggtcagaagtgtttccaaatgtctccggtttaggggacTCAGacacgccagagcagggggaatgagacggggaaacgccagagaagggggaatgagagggggaaacaccagagcagggggaatgagacgGGGAAACGCCAGAGAAGGGGGaacgagagggggaaacaccagaacaGGGGGAATGAGAgggggaaacgccagagcaggaggaatgagagggggaaacgtagcagacgaaattcctttttaaaccaaaacgtagcggtgTAAATGGAGCCTCAATCTTGACCCAAAACGACCTTTTTTAGAAGCATTTGCGTTGGGTTCAGGTCTGGTTTTCTCTTTCAGGTTTGGTCTGGTTGGGTCCAACTTTTCACACTTTACAGAAGATTTTGTTTCCTCGATAAAACAGTCGCACGCACATGAACACATCGGCACTGTTGGCATAGCAACAAAGCACAGTAATACCCCCGTGGACCGTCGAAAGATGACTGAATCTGCAAGCGCCTCTCAGACagttttttctcattttaaagaGTTTATCTGGTTAAAGAAGAGTCCTGGTTGTAGAGAGGAGGTTAAACTCGCCCCTCAGTCCTCctgattttcttcttctctcattCTTTTCAGCGTCTCTTCCCGTCTTTCTCCCAGTTGGTGTGGAGCAGCGCCGGGTCTCTGCTCGTCAGCCTCCAAAATGGCTTCCAGATAAAGTTCAGCTTGTGTTGTGATCAGGCCATCAGGACACCTGCAggcaggagacagaaagagggtgGAGTCAGTAGTTAGCACAATGCTAAcgtcttttaaactgaccgttAAAAATACCGTAAAAT

Function

GO:

id name namespace
GO:0005102 signaling receptor binding molecular_function
GO:0005179 hormone activity molecular_function
GO:0030545 receptor regulator activity molecular_function
GO:0048018 receptor ligand activity molecular_function
GO:0098772 molecular function regulator molecular_function

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU45541 True 1498 lncRNA 0.48 3 44738480 44740122
TU45542 False 1362 lncRNA 0.47 3 44738480 44740122

Neighbor

gene id symbol gene type direction distance location
LOC120556004 NA coding downstream 54759 44679054 ~ 44683721 (-)
LOC120556176 LOC103362610,LOC100695157,LOC102311338,LOC102206832 coding downstream 87550 44533423 ~ 44650930 (-)
LOC120556335 NA coding downstream 261213 44446183 ~ 44477267 (-)
LOC120556524 NA coding downstream 683629 44053173 ~ 44054851 (-)
trnav-uac NA coding downstream 801432 43936976 ~ 43937048 (-)
il17a/f1 NA coding upstream 1052 44741174 ~ 44743918 (-)
gtf2a2 gtf2a2 coding upstream 76590 44816712 ~ 44826908 (-)
LOC120556528 NA coding upstream 211184 44951306 ~ 44959853 (-)
LOC120556292 anxa2,LOC103361870,LOC106530007 coding upstream 326660 45066782 ~ 45089495 (-)
LOC120555435 NA coding upstream 466546 45206668 ~ 45208281 (-)
G34183 NA non-coding downstream 47619 44689909 ~ 44690861 (-)
G34164 NA non-coding downstream 116395 44621676 ~ 44622085 (-)
G34163 NA non-coding downstream 132476 44605602 ~ 44606004 (-)
G34149 NA non-coding downstream 246108 44492140 ~ 44492372 (-)
G34148 NA non-coding downstream 246382 44491571 ~ 44492098 (-)
G34260 NA non-coding upstream 32733 44772855 ~ 44773317 (-)
G34270 NA non-coding upstream 143623 44883745 ~ 44924390 (-)
G34267 NA non-coding upstream 151575 44891697 ~ 44892323 (-)
G34266 NA non-coding upstream 162279 44902401 ~ 44966238 (-)
G34283 NA non-coding upstream 191475 44931597 ~ 44932017 (-)
G34078 NA other downstream 648789 44040360 ~ 44089691 (-)
LOC120556522 LOC103374105,LOC102297981 other downstream 925255 43766691 ~ 43813225 (-)
G33914 NA other downstream 1281633 43452712 ~ 43456847 (-)
G33847 NA other downstream 1523493 43214634 ~ 43214987 (-)
G33796 NA other downstream 1747710 42985223 ~ 42990770 (-)
LOC120556527 LOC102787635,LOC101476187,LOC100691227,LOC106610718 other upstream 51860 44791982 ~ 44915666 (-)
G34518 NA other upstream 398534 45138656 ~ 45271013 (-)
G34551 NA other upstream 547683 45287805 ~ 45294207 (-)
G34617 NA other upstream 842375 45582497 ~ 45583667 (-)
G34584 LOC108242767,LOC105923784,LOC108242778 other upstream 1019366 45759488 ~ 45769788 (-)

Expression


Co-expression Network