G34587


Basic Information

Item Value
gene id G34587
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 45813236 ~ 45815964 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU46076
CGGTTACCACCCTTGTTTCTAATGAATTTGCTGTACACATATATGTACGTTCTATGTTCTGTAACCGAATAAACTTTCATTCGTTCATTCATTCACTTTCATTCATATTAAACTCTTTCTgctaagagggagcagcaccACCAAAACCTGAGAGGATATCTCGTCTCACATCACGATATCGATGTAATGTCGACATGTTGCGCAGCCCTACCTCCGGCTGaagcgttagcgttagcgttagctggGAGGAGCTGAGGGACTCGCTGCAGGCCGCCAGGGGCGTGGGTCTGGCTCTGGATGACGCTCACGCCGATGTGGTCGGGTGTGGTTGTTTTCGGCTGTGCCGGCCGGCTCATTTGGATGCGCTGCCTTCAGGTGCTGAGGTCTGAGTCTCCTCAGGTGTGCAGACGAAGGAGTCAGCTGACGGGGAGgcaaggtggggggggggggtttctaCGGAGAGCCTGCAGGACGACAAGGGTCAGGAAGACAGCTCGTGTTGTtactgagaaacacacagagacacacacatacagagatacacacacagatacacactgacagatacacacacacacagatacacactgatatacacacagatacacacagatacacactgacacagggacacacacggagatacacacagatacacactgacacatacagatacacactgacagatacacacacacacacagagagagagaaagatacacacacagacacacacacacacacagagagagagacacacacacagagacacacacacacacacacacacacacacacacacacacacagacacagacacacacacacacacacacagacacacacccctgAAGACCAGGCCAGCAGTACTCTGGGGGACACCCTGAGGCACATTTAGCCTAATGAGTTGGGCAAATTACACAAacaactagggctgctcgaGCATGGccaaatatataattatttcGGTCAATTCGGGGGGgggtccttctgacattacacaataataaaaagtcataattttagttttgggatacatttttacttcttccaaccatatgttaaattaagagtcaatgtagatttacatattgcaataatatcataatcctaaaaTCATAATCACTGAGAAAACTAACCTTTCTAGATGTTGTTCCtctggccaggtcatcatcaacaAACACCATTAGTACATTCAAGACTTTGTCCttgttgatattagctgctttatttacacttattaaaaacgtggcattgcttatcttttcatatagctagacgtctagaCTCTgggacttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactactTTGCATccgattggctagaactcgttcCATTGGTAGGTGGTAAGTTCGATGACTGGTTAAATCCAGAtaatcaaaaacaaatcccatgtggacttattaatttatttaaatttcgccaaaaggtgagtgattttcatgtctggtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

NR:

description
PREDICTED: vesicle transport through interaction with t-SNAREs homolog 1A isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU46076 True 1539 lncRNA 0.45 2 45813236 45815964

Neighbor

gene id symbol gene type direction distance location
LOC120555463 NA coding downstream 8605 45803287 ~ 45804631 (-)
LOC120555462 NA coding downstream 24533 45786996 ~ 45788703 (-)
LOC120555455 NA coding downstream 101129 45709732 ~ 45712107 (-)
wdr59 wdr59 coding downstream 206949 45579658 ~ 45606287 (-)
LOC120555448 NA coding downstream 237871 45571016 ~ 45575365 (-)
LOC120556539 NA coding upstream 301260 46117224 ~ 46125696 (-)
LOC120555950 NA coding upstream 312836 46128800 ~ 46143264 (-)
LOC120556278 NA coding upstream 508446 46324410 ~ 46329576 (-)
LOC120556031 LOC103372833 coding upstream 520330 46336294 ~ 46342517 (-)
LOC120555469 NA coding upstream 612149 46428113 ~ 46469487 (-)
G34644 NA non-coding downstream 465 45812493 ~ 45812771 (-)
G34643 NA non-coding downstream 1569 45811344 ~ 45811667 (-)
G34639 NA non-coding downstream 28325 45742623 ~ 45784911 (-)
G34586 NA non-coding downstream 71632 45728733 ~ 45741604 (-)
G34638 NA non-coding downstream 81021 45731350 ~ 45732215 (-)
G34582 NA non-coding upstream 10017 45825981 ~ 45827441 (-)
G34598 NA non-coding upstream 15723 45831687 ~ 45871091 (-)
G34590 NA non-coding upstream 43255 45859219 ~ 45918530 (-)
G34604 NA non-coding upstream 66676 45882640 ~ 45883061 (-)
G34599 NA non-coding upstream 74201 45890165 ~ 45890646 (-)
G34584 LOC108242767,LOC105923784,LOC108242778 other downstream 43448 45759488 ~ 45769788 (-)
G34617 NA other downstream 229569 45582497 ~ 45583667 (-)
G34551 NA other downstream 519029 45287805 ~ 45294207 (-)
G34518 NA other downstream 542223 45138656 ~ 45271013 (-)
LOC120556527 LOC102787635,LOC101476187,LOC100691227,LOC106610718 other downstream 897570 44791982 ~ 44915666 (-)
G34594 NA other upstream 38676 45854640 ~ 45857478 (-)
LOC120555951 LOC104934393,LOC103372831 other upstream 329020 46144984 ~ 46184302 (-)
vps13c vps13c other upstream 383740 46199704 ~ 46317024 (-)
G34718 NA other upstream 539555 46355519 ~ 46356020 (-)
G34812 NA other upstream 771091 46587055 ~ 46588046 (-)

Expression


Co-expression Network