G34717



Basic Information


Item Value
gene id G34717
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 46348890 ~ 46349257 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU46240
ttatctcgagacactttacagatagagtaggtctagaccacactctataatttacaaagccccaacaattccaacaattccagtaattccctcaagagcaagcagtgcgacagtggcgaggaaaaactccctcttgggaagaaacctgggacagacccaggctcttggtaggcggtgtctgacgagccggttgggggtgtgatgaacagtggcgataatagtcacattaataatggaacagtgactggatgtagcgggaagctgcagggttcagcaggacgcagcatgacattgcagggcatcgctgagctcagcagggagtgcagcaggaccacggcgacagctgcaaccagggtcttggtgccaac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU46240 True 368 lncRNA 0.52 1 46348890 46349257

Neighbor


gene id symbol gene type direction distance location
LOC120556031 LOC103372833 coding downstream 6373 46336294 ~ 46342517 (-)
LOC120556278 NA coding downstream 19314 46324410 ~ 46329576 (-)
LOC120555950 NA coding downstream 205626 46128800 ~ 46143264 (-)
LOC120556539 NA coding downstream 223194 46117224 ~ 46125696 (-)
LOC120555463 NA coding downstream 544259 45803287 ~ 45804631 (-)
LOC120555469 NA coding upstream 78856 46428113 ~ 46469487 (-)
tppp3 tppp3,LOC102289613,LOC100709027 coding upstream 230392 46579649 ~ 46586118 (-)
hsd11b2 NA coding upstream 297076 46646333 ~ 46692686 (-)
G34716 NA non-coding downstream 608 46347873 ~ 46348282 (-)
G34705 NA non-coding downstream 26313 46322304 ~ 46322577 (-)
G34694 NA non-coding downstream 99316 46249236 ~ 46249574 (-)
G34691 NA non-coding downstream 244426 46104070 ~ 46104464 (-)
LOC120556329 NA non-coding downstream 317793 46028585 ~ 46031097 (-)
G34725 NA non-coding upstream 19136 46368393 ~ 46451340 (-)
G34792 NA non-coding upstream 158015 46507272 ~ 46530575 (-)
G34793 NA non-coding upstream 160994 46510251 ~ 46564157 (-)
G34806 NA non-coding upstream 252929 46602186 ~ 46656956 (-)
G34808 NA non-coding upstream 253640 46602897 ~ 46678134 (-)
vps13c vps13c other downstream 31866 46199704 ~ 46317024 (-)
LOC120555951 LOC104934393,LOC103372831 other downstream 164588 46144984 ~ 46184302 (-)
G34594 NA other downstream 491412 45854640 ~ 45857478 (-)
G34584 LOC108242767,LOC105923784,LOC108242778 other downstream 579102 45759488 ~ 45769788 (-)
G34617 NA other downstream 765223 45582497 ~ 45583667 (-)
G34718 NA other upstream 6262 46355519 ~ 46356020 (-)
G34812 NA other upstream 237798 46587055 ~ 46588046 (-)
zdhhc1 zdhhc1,LOC106532171,LOC107755028 other upstream 245715 46594972 ~ 46618637 (-)
LOC120556544 LOC106905454,LOC104943346,LOC107096264,LOC106938658 other upstream 466038 46815295 ~ 46823733 (-)

Expression



Co-expression Network