LOC120555232


Basic Information

Item Value
gene id LOC120555232
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1246885 ~ 1251901 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793914.1
tctacttttgtgcaacaggccccagcTGGTCTTCTAggcgtcagctaatggggatcctttaTAATAAATCCAAATACAAATCCTCAGCTATTGCTTACCCTAAGATAGTGACCTACTGACTTTGTTTGGCTTGACACCTGATCCTGCTGCTCTGTCATAGTACTGTTCTCATGTTATATTAATGGAATTCCACCACCTCAATTATGAATTGCAATATGTTATTTCCATGGCCTAGGAAAGTTCAACCTCCGCAGTTTTGGGAACAGAGCATTCTCTagggcagctcccaggctctggaactccctcgcCCAAGAGGGACCTTGGGTCCCTCACCATATTCATCtcgacccatctcttcacctctgcctatcCCTAGCCCCACAACCCCCTCCCTTGTGcctgaatcttgttttgtttgtttgtctttattaTCTATATCTACCCTGTAAAGAGACTTTGAGTTCGTGAAAAGCTCTATATAAATTCAGTGTATTATTATTTGTGAACATGAgctactctctctctcaaagccaGAAACCAGAGTAAACCCAGTAAGGGCATCAAGACCTATTAAGTCCCTTTGGgatcagatagatagatagatagatacttacTTTATTTATGCTGAGGGCAATGTTATCTGTGGGATCTGGGGATTGGCTAATAAGGACTGATGATTGACACCTGGATGAACTGATTGCTCACGTGTCCAGAAATAGGAGTGCCTGGGCagtccctcttcctctctccctcctcaagGCTGCTTGGTTTGTTTGGACTTTGGGTTGAGTTACTTTTGCATTGTAGCATTGCTACTCCTACACACATCCATCCACTACACACATTACTGATAAACCGATAGCACGTTTAcctttgcttatttaaataaatttgatttAATAGAGCAAACGTGTTCTCCACATTTTGTCATGAGCCAGGTCATGACACTTGTGATGTCATCATGTAAGGTGACAGTGAAATTAAGACTCTTCCAGGCATCCAAGACTCAACGGCCAAATGAGCTTCATTTTATTGTAGTGTTCTCCGTTCTGAAACAGAACATGTACCCATATACTTAGAACATTCCCCTGCAGCTCTCAGTGCCATTTATAACATTTTCCCCAATTCATTGTCTATTTAGCACTTCCAGACTATACATCAGAAATTTGAGTTCTAGCGCTCTAGTTTTTGGATTTGGGAGAGAGTTGTTCGCGTTTACTAATATTTTTGGACTATGAATAGCATCTATGAATAGCATCCTTTCTGAAGACAACATGGAGAGAAACATCCCCAGGCTTCTCCTCATCCACCTCATCTTTGtcatcctctccactcctccGTGTGCAGCCACTACAGGCCTGAGCATCTTAAAGGTTGTCCCCATCTCCAATCCGTATAGCTGGGCTGTTGCTCAGAACTACTGCAGATGGCACCATAGTGACTTGATCACCATCAAAACCCAACAGGAGGCTGACAAGCTTGCCCCGTATGAAGGCTGGATTGGTCTGTATAGCGATACATCGTCACCGGAGTGGAAATGGTCCAGAGGAGATGAGAGAGCCACATTCTTCAACTGGGATTCAAATGAACCAGACCATAACCAGCACTGTGTTTTGATGCACAACTCAGCTCCAAAATGGAAAAGTGAAGATTGCTCTAGCAGTCAGCCCTTCTTGTGTGATGAAGGCCTGATTCTGGTCCAGGAGAATAAGACATGGGAAGAAGCCTTGGTGCACTGCACACAGCTGGAGGCTGCGGGCAGCACCACATGCCCGTACCAGCTTGCCATCCTGTCAGAACCAAACGACAATCTGATGGACACAGAGACAATAAGATTGAATGCAACCACTTCTGAGGTGTGGGTTGGACTGCGTTTCCtggctggtgattggctgtggATGAGCCCAAACACGAGCTCCGACCTTCCTCAATGTCCTGCAGAGCAGCAGCACTGCGGCGCCCTGGTTCCCGGTAACACCGAGTGGAAGATCATGAGCTGTAGTGAGAAAAGAAACTTCCTCTGCAGCAGAAGACCCACCAAATAACTGTATGTTTTTCCTCGATAAACGTTTGTGTTCTCTTAAAAGGATGTAAGAAATGATTTAATGTGGATTAAAGTGCTTTGAGTTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793914.1 True 2132 mRNA 0.45 4 1246885 1251901

Neighbor

gene id symbol gene type direction distance location
glo1 glo1,LOC103369175,LOC104919745 coding upstream 6428 1228417 ~ 1240457 (+)
eprs1 eprs,LOC102787790 coding upstream 19227 1204494 ~ 1227658 (+)
kif13ba LOC103358451,LOC107099140,LOC107397337 coding upstream 83867 1103597 ~ 1163018 (+)
mrps11 LOC107594750 coding upstream 209392 1030354 ~ 1037493 (+)
LOC120556381 akap13,LOC103359499,LOC102788190 coding upstream 776155 349112 ~ 470730 (+)
LOC120555381 LOC102205592,LOC102787001,LOC102297232,LOC101476278,LOC100534518 coding downstream 11049 1262950 ~ 1269003 (+)
LOC120555491 NA coding downstream 56921 1308822 ~ 1311760 (+)
LOC120556244 LOC103369184,LOC102786692,LOC100700148,LOC101476567,LOC102297530 coding downstream 60547 1312448 ~ 1364726 (+)
LOC120556440 LOC104962514,LOC103369193,LOC107381980,LOC106931206 coding downstream 126109 1378010 ~ 1385075 (+)
zgc:165481 LOC103369239,LOC108241605,LOC103379234 coding downstream 422840 1674741 ~ 1698359 (+)
G24926 hmbox1,LOC104919714 non-coding upstream 61658 1184725 ~ 1185227 (+)
G24920 LOC104919714 non-coding upstream 68704 1175326 ~ 1178181 (+)
G24918 NA non-coding upstream 77190 1165649 ~ 1169695 (+)
G24923 NA non-coding upstream 112283 1134061 ~ 1134602 (+)
G24890 NA non-coding upstream 299825 946797 ~ 947060 (+)
G24972 NA non-coding downstream 1296 1253197 ~ 1254591 (+)
G24984 NA non-coding downstream 6618 1258519 ~ 1258816 (+)
G24991 NA non-coding downstream 50818 1302719 ~ 1302952 (+)
G25011 NA non-coding downstream 134147 1386048 ~ 1386264 (+)
G25008 NA non-coding downstream 161194 1413095 ~ 1415747 (+)
mapk8ip1b mapk8ip1,LOC102793463 other upstream 1162459 11843 ~ 84426 (+)
G25173 dnaja2,LOC106524269 other downstream 587432 1839333 ~ 1842811 (+)
G25204 NA other downstream 830057 2081958 ~ 2083319 (+)
adamts18 adamts18 other downstream 988513 2240414 ~ 2312157 (+)
mmp15b mmp15,LOC104948393 other downstream 2229396 3481297 ~ 3518086 (+)
G25431 NA other downstream 2533032 3784933 ~ 3785542 (+)

Expression


Co-expression Network