XLOC_005071 (CU929359.1)


Basic Information

Item Value
gene id XLOC_005071
gene name CU929359.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 2579237 ~ 2617510 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009869
GAGACAAGTCGCATTCTTATAGCGAGTCAATGGATGATTCAAACAATGATTCACATGAGCCCTAAAACGCCTCTAATAACCCTGCTTGAAGCGAATTGCTGTTCTCCATCGACTTCATCGAGAGTTTTTGTCGTCGACGGAGTAATAGATGAAGATCCGTCCTGCTCTGGGATGATGCACTGATGCACTTCTCTGAGATGTTCGGTCCCCCCAGGAGAAGACCTTCATTGAAATGCTCCTTTGACTTGATCAGTCATGCTTCAGCTGCAGGTCAGTTGGCCTATTTTCTCTGATACTGCTGGAAGTGTTCCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096691

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009869 True 312 lncRNA 0.46 2 2579237 2617510

Neighbor

gene id symbol gene type direction distance location
XLOC_005070 mapk8b coding downstream 56750 2505519 ~ 2522487 (-)
XLOC_005069 NA coding downstream 99306 2067963 ~ 2479931 (-)
XLOC_005068 NA coding downstream 577413 2000636 ~ 2001824 (-)
XLOC_005067 NA coding downstream 577747 2000019 ~ 2001490 (-)
XLOC_005066 sox9a coding downstream 627953 1947593 ~ 1951284 (-)
XLOC_005072 NA coding upstream 8159 2625669 ~ 2669500 (-)
XLOC_005073 NA coding upstream 85845 2703355 ~ 2744641 (-)
XLOC_005074 ubtd1b coding upstream 162680 2780190 ~ 2800859 (-)
XLOC_005075 zdhhc16b coding upstream 232074 2849584 ~ 2869584 (-)
XLOC_005076 fam20a coding upstream 289100 2906610 ~ 2940070 (-)
XLOC_005063 CU694266.1 non-coding downstream 1088649 1490472 ~ 1490588 (-)
XLOC_005062 NA non-coding downstream 1125898 1452900 ~ 1453339 (-)
XLOC_005083 NA non-coding upstream 664246 3281756 ~ 3284909 (-)
XLOC_005086 NA non-coding upstream 901658 3519168 ~ 3544016 (-)
XLOC_005087 NA non-coding upstream 952237 3569747 ~ 3570081 (-)

Expression


Co-expression Network