LOC120555381 (LOC102205592,LOC102787001,LOC102297232,LOC101476278,LOC100534518)


Basic Information

Item Value
gene id LOC120555381
gene name LOC102205592,LOC102787001,LOC102297232,LOC101476278,LOC100534518
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1262950 ~ 1269003 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794041.1
GCCGCGCCCACGGAGCGACGGACGCGCACACGGGAGCTTCTGAGAGCAAACTGCGTCTGGAAAAACTCGTGAAGGAACACTGAGATCAAACTGAGAGGGAAGACTGGAGACTACTCTAACTCAGTGCTGTATTCATCATAAGAAGTCCAGCAGCGAGGTGGCGCCGCGGCAGGGTCTGGCACTTCCTTAAAGAAGATTTCACTTATTTATCACTAAATAAGTATGTGGGACATACATCGCTCCACGGCAACACGGACATACGGTAAATCCTCCATGTAGCTGGACAAACGCTGACTACTTGGTGAGGGTCATAAAATGAACGCCTCGTGCTGGGATCCTGCAGTCATCATGTATCAGCAGAGCTCAGGGTTTGACCTCAATGCCAGCTGTGACTGGCTGACCCCTCACTGTAACTGGACATCAGTGGACAGAGCACTGCAGCTGCCTACCTTTTCTACAGCGGCCAAAGTCAGAGTGATCATTACCTTCATCCTGTGTGGCATTGCCACTTTCTGCAATTTGGCTGTGCTGTGGGCAGTCAATGGCCACAAGCGCCAGTCCCACGTCCGTGTGCTGATAATCAACCTGACTGCTGCCGATCTCTTGGTTACTTTCATTGTGATGCCTGTGGACGCAGTGTGGAACATCACAGTTCAGTGGCTGGCCGGTGACCTGGCCTGCAGATTTCTGATGTTCCTCAAGCTGCAGGCCATGTACTCCTGTGCCTTTGTCACAGTGGTGATTAGTCTGGACAGACAGTCGGCTATCCTCAACCCTCTGGCCATCAGCATGGCCCGTAAAAGAAACAGGGTCATGCTGATGGTGGCTTGGACTATGAGCGCCTTGTTCTCAATCCCTCAGATGTTCATTTTCCATAATGTGACCATCACATATCCAGCCAACTTTACTCAGTGCACAACTAGGGGGAGCTTTGTCACTCACTGGCAGGAAACAGCCTACAACATGTTCACCTTCTCCTGCCTCTTCCTGCTGCCGCTGGTCATAATGATTGTCTGCTACACCAGGATCTTCATCCAGATCTCCAAACGGATGACGAAAAAGAACTCGTCCTCAAACGAGCCACATCTCCGTTGCTCAAAGAACAACATCCCCAAAGCTAGAATGAGAACTCTGAAAATGAGCATCGTCATAGTGATCTGCTTCATCGTCTGCTGGACTCCATACTACCTGTTGGGTTTGTGGTACTGGTTCTTCCCAGACGACCTGGAGGGGAAAGTCTCCCACTCCCTCACCCACATCCTCTTCATCTGTGGGCTTTTCAATGCCTGCCTGGACCCAATCATCTATGGCCTGTTCACCATGCGCTTCCACAGGGGGCTAAGGAGCTGCTACCGCAACACAAGAGTGATGTCAGACCTGGAGACGAATAAAATGAAGTGTACTGCCACTGCTTTGCCCTATGAAAGGAGGATGGCTACTGGTGAAAAAGACAGCAACTGTGGACAGGCTGAGTCAAAATCTCCTCTGAAGGGAGATACCCTTGTTATTTCAGCGCTGAGTGTACAACATGATCAGAAAACAGAGCAGAACCAGGATCTTGACACTGCTAATAGAACTGGTTAAAACATTTCACCTTTTTCAGAGTTATCTGTAGCCTTGGAACCAGACAAATCTGCAAGCTCATGTCTCATCTGCTCTGGCAGATGAGCTTGGTCCTCCTGTCGGTCAGGCAGATTTCCAGCCAACCAGATCCTGGTTGGGCCAATCACAGCCGTTTGTTGAGACTGACAAGTTGCGGAGCCTTAGTGCTTTGTTTTTGGCTTGTGCACACTCGCCCAGGGAAATTACAGCGAGCGTAAACCGAGCTAAGTAAAGAGGAGCGTCGTTGAGGCATTTTCAAAAACACCcaagatggctgcagctgatgtgGAACTTTCTGTTGGCAAAAACGGCAACCCACGTTCACACACATGTTGATGCTACACTATCAGAGCTCATCTCTGCATGCTATAGTCTGTTTACATTTTTCGTtgcgctgattggttgtaggtccatCCAACTGGTCCAGAGGAAAATGAACTGAGAGGTTCCAGTCTAACTCGCATTTGCGATTTTGGTCTGGCGATGTCAGGCTAGGCTATCTGTATACTGGACATGTTTATTTCACAATCACACCTACCATGCATGTGTAGAATAAGTCTGAAAACATACAATATCCATCACCTagatgtgtctttgtgtctgtggtgCTCAAGGCTGCATCTTACTTGAGGCTTATATAACATCTTTTTGAACACACTAAATATGTTTGGAGCTGTTTGTtgctttgtgtgttgtgtaagtggcTCCTATTTTAAGACAAGTCTCCCATATACATTTACCAGGGTCAGGAAATGGCTTCAGGACTAAATGAAAAATAGAGGACAGTGATTGTCAGGTTACACAACAGTGCTGCCTATGTTGCATGTGGTTACGCACCACCTATATCAGattcagatacattttttattgtccTATACAGAGGGAATTTGCTTTCAGTCTGTACACATTTAATACTCAAAACTGGTAACATCCAAAAACAGAGCACAAGCAGACAAGCACATCACAACACACAAGTCTGTTACAGTGTGCCATTTAGGGCAGAAATGGTCTGTAAGGAAGCTTTTAAATGACTGTTGAGGTTACTGAGGTTGAGAGCTTTTATTTGCAGCCACAGTACCACAAAACAAGACTAGAAGTTTTACAGGTGCATTATCCTGTCCATTCCCTTAGCAAAAACAATGAACCACATGTAGGAAAATGTTACTAAGGATTTTAATCATGGCCCCAGTAattcatgacagtgtgacagtgagtcagcatgcacaatgacaggaccctgaaactgatgCAGCTTAATTGTTGTTTACTCCTGTGTTTTTCATACTGTGACATATTATTATCATTGATTAATCTGGCGATTATTTTATCCATGAATTGTTTGgtccataaaatgtcagaaattggTGAATAATACAGATCACAATTTCTAAgttgatgtttttaaattacatgTTTGGCCCGACCAAcagttcaaaatccaaatatattcaatttactgTCTCATAAGACAGGAAAGCAGCAGCTCCCCATAACTGAGACGCTGGAACTAGGTACTCTTTGGCTATTTTTGCTTCAAAAATTATGTAAGGATTAATTGGCAGTTAAAATAGTTGACGAAGGATTTTCTGTTGATCGGCTAATGGATCAATCGACTAACAGTTCAGCTCTAGCTGTTACAATCGGGTCCATCCTCCCTCAGAATCTTTCAAATGGCATATATATTTTGagtgtaataaacatttaagtGTTTTGGATACAGTGTAAACTGATGCCAGAGTATTTGTGTTGTTACAAATTGCAAATACATGATCATCAAATGTATCTAAATAAACTACAACAAAAATCA
>XM_039794042.1
GCCGCGCCCACGGAGCGACGGACGCGCACACGGGAGCTTCTGAGAGCAAACTGCGTCTGGAAAAACTCGTGAAGGAACACTGAGATCAAACTGAGAGGGAAGACTGGAGACTACTCTAACTCAGTGCTGTATTCATCATAAGAAGTCCAGCAGCGAGGTGGCGCCGCGGCAGGGTCTGGCACTTCCTTAAAGAAGATTTCACTTATTTATCACTAAATAAGTATGTGGGACATACATCGCTCCACGGCAACACGGACATACGCCTCCATGTAGCTGGACAAACGCTGACTACTTGGTGAGGGTCATAAAATGAACGCCTCGTGCTGGGATCCTGCAGTCATCATGTATCAGCAGAGCTCAGGGTTTGACCTCAATGCCAGCTGTGACTGGCTGACCCCTCACTGTAACTGGACATCAGTGGACAGAGCACTGCAGCTGCCTACCTTTTCTACAGCGGCCAAAGTCAGAGTGATCATTACCTTCATCCTGTGTGGCATTGCCACTTTCTGCAATTTGGCTGTGCTGTGGGCAGTCAATGGCCACAAGCGCCAGTCCCACGTCCGTGTGCTGATAATCAACCTGACTGCTGCCGATCTCTTGGTTACTTTCATTGTGATGCCTGTGGACGCAGTGTGGAACATCACAGTTCAGTGGCTGGCCGGTGACCTGGCCTGCAGATTTCTGATGTTCCTCAAGCTGCAGGCCATGTACTCCTGTGCCTTTGTCACAGTGGTGATTAGTCTGGACAGACAGTCGGCTATCCTCAACCCTCTGGCCATCAGCATGGCCCGTAAAAGAAACAGGGTCATGCTGATGGTGGCTTGGACTATGAGCGCCTTGTTCTCAATCCCTCAGATGTTCATTTTCCATAATGTGACCATCACATATCCAGCCAACTTTACTCAGTGCACAACTAGGGGGAGCTTTGTCACTCACTGGCAGGAAACAGCCTACAACATGTTCACCTTCTCCTGCCTCTTCCTGCTGCCGCTGGTCATAATGATTGTCTGCTACACCAGGATCTTCATCCAGATCTCCAAACGGATGACGAAAAAGAACTCGTCCTCAAACGAGCCACATCTCCGTTGCTCAAAGAACAACATCCCCAAAGCTAGAATGAGAACTCTGAAAATGAGCATCGTCATAGTGATCTGCTTCATCGTCTGCTGGACTCCATACTACCTGTTGGGTTTGTGGTACTGGTTCTTCCCAGACGACCTGGAGGGGAAAGTCTCCCACTCCCTCACCCACATCCTCTTCATCTGTGGGCTTTTCAATGCCTGCCTGGACCCAATCATCTATGGCCTGTTCACCATGCGCTTCCACAGGGGGCTAAGGAGCTGCTACCGCAACACAAGAGTGATGTCAGACCTGGAGACGAATAAAATGAAGTGTACTGCCACTGCTTTGCCCTATGAAAGGAGGATGGCTACTGGTGAAAAAGACAGCAACTGTGGACAGGCTGAGTCAAAATCTCCTCTGAAGGGAGATACCCTTGTTATTTCAGCGCTGAGTGTACAACATGATCAGAAAACAGAGCAGAACCAGGATCTTGACACTGCTAATAGAACTGGTTAAAACATTTCACCTTTTTCAGAGTTATCTGTAGCCTTGGAACCAGACAAATCTGCAAGCTCATGTCTCATCTGCTCTGGCAGATGAGCTTGGTCCTCCTGTCGGTCAGGCAGATTTCCAGCCAACCAGATCCTGGTTGGGCCAATCACAGCCGTTTGTTGAGACTGACAAGTTGCGGAGCCTTAGTGCTTTGTTTTTGGCTTGTGCACACTCGCCCAGGGAAATTACAGCGAGCGTAAACCGAGCTAAGTAAAGAGGAGCGTCGTTGAGGCATTTTCAAAAACACCcaagatggctgcagctgatgtgGAACTTTCTGTTGGCAAAAACGGCAACCCACGTTCACACACATGTTGATGCTACACTATCAGAGCTCATCTCTGCATGCTATAGTCTGTTTACATTTTTCGTtgcgctgattggttgtaggtccatCCAACTGGTCCAGAGGAAAATGAACTGAGAGGTTCCAGTCTAACTCGCATTTGCGATTTTGGTCTGGCGATGTCAGGCTAGGCTATCTGTATACTGGACATGTTTATTTCACAATCACACCTACCATGCATGTGTAGAATAAGTCTGAAAACATACAATATCCATCACCTagatgtgtctttgtgtctgtggtgCTCAAGGCTGCATCTTACTTGAGGCTTATATAACATCTTTTTGAACACACTAAATATGTTTGGAGCTGTTTGTtgctttgtgtgttgtgtaagtggcTCCTATTTTAAGACAAGTCTCCCATATACATTTACCAGGGTCAGGAAATGGCTTCAGGACTAAATGAAAAATAGAGGACAGTGATTGTCAGGTTACACAACAGTGCTGCCTATGTTGCATGTGGTTACGCACCACCTATATCAGattcagatacattttttattgtccTATACAGAGGGAATTTGCTTTCAGTCTGTACACATTTAATACTCAAAACTGGTAACATCCAAAAACAGAGCACAAGCAGACAAGCACATCACAACACACAAGTCTGTTACAGTGTGCCATTTAGGGCAGAAATGGTCTGTAAGGAAGCTTTTAAATGACTGTTGAGGTTACTGAGGTTGAGAGCTTTTATTTGCAGCCACAGTACCACAAAACAAGACTAGAAGTTTTACAGGTGCATTATCCTGTCCATTCCCTTAGCAAAAACAATGAACCACATGTAGGAAAATGTTACTAAGGATTTTAATCATGGCCCCAGTAattcatgacagtgtgacagtgagtcagcatgcacaatgacaggaccctgaaactgatgCAGCTTAATTGTTGTTTACTCCTGTGTTTTTCATACTGTGACATATTATTATCATTGATTAATCTGGCGATTATTTTATCCATGAATTGTTTGgtccataaaatgtcagaaattggTGAATAATACAGATCACAATTTCTAAgttgatgtttttaaattacatgTTTGGCCCGACCAAcagttcaaaatccaaatatattcaatttactgTCTCATAAGACAGGAAAGCAGCAGCTCCCCATAACTGAGACGCTGGAACTAGGTACTCTTTGGCTATTTTTGCTTCAAAAATTATGTAAGGATTAATTGGCAGTTAAAATAGTTGACGAAGGATTTTCTGTTGATCGGCTAATGGATCAATCGACTAACAGTTCAGCTCTAGCTGTTACAATCGGGTCCATCCTCCCTCAGAATCTTTCAAATGGCATATATATTTTGagtgtaataaacatttaagtGTTTTGGATACAGTGTAAACTGATGCCAGAGTATTTGTGTTGTTACAAATTGCAAATACATGATCATCAAATGTATCTAAATAAACTACAACAAAAATCA

Function

NR:

description
PREDICTED: putative gonadotropin-releasing hormone II receptor

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0097211 cellular response to gonadotropin-releasing hormone biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004968 gonadotropin-releasing hormone receptor activity molecular_function

KEGG:

id description
K04280 GNRHR; gonadotropin-releasing hormone receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794041.1 True 3409 mRNA 0.45 4 1262950 1269003
XM_039794042.1 False 3403 mRNA 0.45 4 1262950 1269003

Neighbor

gene id symbol gene type direction distance location
LOC120555232 NA coding upstream 11049 1246885 ~ 1251901 (+)
glo1 glo1,LOC103369175,LOC104919745 coding upstream 22493 1228417 ~ 1240457 (+)
eprs1 eprs,LOC102787790 coding upstream 35292 1204494 ~ 1227658 (+)
kif13ba LOC103358451,LOC107099140,LOC107397337 coding upstream 99932 1103597 ~ 1163018 (+)
mrps11 LOC107594750 coding upstream 225457 1030354 ~ 1037493 (+)
LOC120555491 NA coding downstream 39819 1308822 ~ 1311760 (+)
LOC120556244 LOC103369184,LOC102786692,LOC100700148,LOC101476567,LOC102297530 coding downstream 43445 1312448 ~ 1364726 (+)
LOC120556440 LOC104962514,LOC103369193,LOC107381980,LOC106931206 coding downstream 109007 1378010 ~ 1385075 (+)
zgc:165481 LOC103369239,LOC108241605,LOC103379234 coding downstream 405738 1674741 ~ 1698359 (+)
slc7a10a LOC104919817,LOC103369274 coding downstream 520950 1789953 ~ 1817994 (+)
G24984 NA non-coding upstream 4134 1258519 ~ 1258816 (+)
G24972 NA non-coding upstream 8359 1253197 ~ 1254591 (+)
G24926 hmbox1,LOC104919714 non-coding upstream 77723 1184725 ~ 1185227 (+)
G24920 LOC104919714 non-coding upstream 84769 1175326 ~ 1178181 (+)
G24918 NA non-coding upstream 93255 1165649 ~ 1169695 (+)
G24991 NA non-coding downstream 33716 1302719 ~ 1302952 (+)
G25011 NA non-coding downstream 117045 1386048 ~ 1386264 (+)
G25008 NA non-coding downstream 144092 1413095 ~ 1415747 (+)
G25144 NA non-coding downstream 500279 1769282 ~ 1774440 (+)
G25203 NA non-coding downstream 913803 2182806 ~ 2183770 (+)
mapk8ip1b mapk8ip1,LOC102793463 other upstream 1178524 11843 ~ 84426 (+)
G25173 dnaja2,LOC106524269 other downstream 570330 1839333 ~ 1842811 (+)
G25204 NA other downstream 812955 2081958 ~ 2083319 (+)
adamts18 adamts18 other downstream 971411 2240414 ~ 2312157 (+)
mmp15b mmp15,LOC104948393 other downstream 2212294 3481297 ~ 3518086 (+)
G25431 NA other downstream 2515930 3784933 ~ 3785542 (+)

Expression


Co-expression Network