LOC120555411


Basic Information

Item Value
gene id LOC120555411
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 43417323 ~ 43429155 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794089.1
ttcctcctccttcccagCTGAAGTATCTGTAGGTGAGTATTTGGGTCAGAGCCGTGCATCAGCCTGGACACACAACAGGGACAGAGACCAAGGACCATCATTAAAACTGAGAGAAGCTTGAACTAACAGGTCAAAGATGGAGCTGAAGGTGTGGGTGGAGGGCGCGGTCAGAGTGGTCTGCGGCCTATCACTGAAAACTTCCTGCCAGGATGTCGTCATAGCTCTTGCACAAGCGATTCGTCAGACCGGTCGTTACATTCTTATCTTCAAGATACGAGGCACTGAGAGACAGCTGGTTGCCGACGACTGTCCTCTTCAGCTTCTGGCTCAGCTGGGACAGCTGGCTTCAGAGGTCCAGTTCATTCTGCGGAGGACAGGTCCCAGCCTCAGTGATGCTCGAGACACACCCGAAACAAAAAGACGTTTTCCCCTTCCCCAACCATCAGAACCCGAGCCCCTCAAACGCAACGAGCCACACAAGGCTCTCACCTTCAGTCTGGGCCCCTCAACACATCCCAAGAGGACCAAACCCAGCCGGGCCTGGTCTCCGTCACCCCGAGACTCCCCAGAACCCAGAGCTTCCCCTGTCTCTTTCCTAGACCCTGTCAACCCTGTGGAGGCAATTCCCCCTTCCTCCTCCAAAGAGGAGATGTTTAGGCAGATTCTGCAGCAGCAGTATAGGCTGCAAGACCTGGAGATTCAGCTTCACGctctggagagagagacagaggtgtTGGAGCGAGCACGGTCGTCTGCCACAGTTCCTGGTCTGACTCCGGTCCCTGAAGGCGAACTGGAGAAACTGGAGCAGCGTCTGAGGCAGAATGAGGCAGATTTGATGCACAGCGAGCATTGGGAGGAGCAGTTACAGGAAGAGCTGGACCGAGAACAAGAAATGCATAGACGTCTACACCAGATACACTCATCAATGGATGATGACAGTCATCGGATCAAGGAGCTCCAAGCGCGTTCTGAACATCTACAACAGCACATAGAGCACAGAGCCCACAGACAAAGGTCTCGGGCCAGCGCTCGGCAGCCAGAAGAGACCCTGAGGCCTCTGGAGCAGGAGCTCCACTTCCGCCTGCAGCAGGGAGAGGAACTGGCTGCAACGCTGTCAGAGACAAAGAGGGTCCGACAAACTACGGAGGAAAAGCTGCAGGACCGATGGAAGACGGTGGAGGATCTGAACATGGAGCTGAGACAGTGTAAGCTGCAGCAGTTTATCCAGCAGACCGGCAGTCCAAACGCAGACCAGACTAACTTTCTGCCTGTCCCTGAAGTTTACCTCAGCAGCGCTGGTATAATGGAGTAGGAGCAGCCAAGTCACTGACCTCATGAACTGGAAGTTCTCTGAAACCTCTAAAGCccgtccagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
>XM_039794090.1
tcttcctcctccttcccagCTGAAGTATCTGTAGGTGAGTATTTGGGTCAGAGCCGTGCATCAGCCTGGACACACAACAGGGACAGAGACCAAGGACCATCATTAAAACTGAGAGAAGCTTGAACTAACAGGTCAAAGATGGAGCTGAAGGTGTGGGTGGAGGGCGCGGTCAGAGTGGTCTGCGGCCTATCACTGAAAACTTCCTGCCAGGATGTCGTCATAGCTCTTGCACAAGCGATTCGTCAGACCGGTCGTTACATTCTTATCTTCAAGATACGAGGCACTGAGAGACAGCTGGTTGCCGACGACTGTCCTCTTCAGCTTCTGGCTCAGCTGGGACAGCTGGCTTCAGAGGTCCAGTTCATTCTGCGGAGGACAGGTCCCAGCCTCAGTGATGCTCGAGACACACCCGAAACAAAAAGACGTTTTCCCCTTCCCCAACCATCAGAACCCGAGCCCCTCAAACGCAACGAGCCACACAAGGCTCTCACCTTCAGTCTGGGCCCCTCAACACATCCCAAGAGGACCAAACCCAGCCGGGCCTGGTCTCCGTCACCCCGAGACTCCCCAGAACCCAGAGCTTCCCCTGTCTCTTTCCTAGACCCTGTCAACCCTGTGGAGGCAATTCCCCCTTCCTCCTCCAAAGAGGAGATGTTTAGGCAGATTCTGCAGCAGCAGTATAGGCTGCAAGACCTGGAGATTCAGCTTCACGctctggagagagagacagaggtgtTGGAGCGAGCACGGTCGTCTGCCACAGTTCCTGGTCTGACTCCGGTCCCTGAAGGCGAACTGGAGAAACTGGAGCAGCGTCTGAGGCAGAATGAGGCAGATTTGATGCACAGCGAGCATTGGGAGGAGCAGTTACAGGAAGAGCTGGACCGAGAACAAGAAATGCATAGACGTCTACACCAGATACACTCATCAATGGATGATGACAGTCATCGGATCAAGGAGCTCCAAGCGCGTTCTGAACATCTACAACAGCACATAGAGCACAGAGCCCACAGACAAAGGTCTCGGGCCAGCGCTCGGCAGCCAGAAGAGACCCTGAGGCCTCTGGAGCAGGAGCTCCACTTCCGCCTGCAGCAGGGAGAGGAACTGGCTGCAACGCTGTCAGAGACAAAGAGGGTCCGACAAACTACGGAGGAAAAGCTGCAGGACCGATGGAAGACGGTGGAGGATCTGAACATGGAGCTGAGACAGTGACCTCATGAACTGGAAGTTCTCTGAAACCTCTAAAGCccgtccagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794089.1 True 1471 mRNA 0.54 6 43417323 43429153
XM_039794090.1 False 1350 mRNA 0.55 6 43417323 43429155

Neighbor

gene id symbol gene type direction distance location
LOC120555495 LOC104938484,LOC103359668,LOC102209123,LOC101072180 coding downstream 9602 43403538 ~ 43407721 (-)
LOC120555429 LOC104938483 coding downstream 16878 43396425 ~ 43400445 (-)
si:ch211-220f16.2 NA coding downstream 26988 43338654 ~ 43390335 (-)
LOC120556519 shank2,LOC102783952 coding downstream 112136 43017721 ~ 43305187 (-)
arfgap2 arfgap2 coding downstream 694449 42704200 ~ 42722874 (-)
LOC120556173 NA coding upstream 5160 43434315 ~ 43437103 (-)
LOC120555671 NA coding upstream 50447 43479602 ~ 43496204 (-)
trnaw-cca_1 NA coding upstream 98426 43527581 ~ 43527653 (-)
LOC120556093 NA coding upstream 280545 43709700 ~ 43756173 (-)
si:ch211-71n6.4 LOC100691126,LOC102786012,LOC102297160,LOC102213240,LOC101463620 coding upstream 388577 43817732 ~ 43848899 (-)
G33886 NA non-coding downstream 4041 43412635 ~ 43413282 (-)
G33885 NA non-coding downstream 5909 43410644 ~ 43411414 (-)
G33875 NA non-coding downstream 79536 43336810 ~ 43337787 (-)
G33857 NA non-coding downstream 81288 43335819 ~ 43336035 (-)
G33854 NA non-coding downstream 88231 43328552 ~ 43329092 (-)
G33918 NA non-coding upstream 60566 43489721 ~ 43489925 (-)
G33960 NA non-coding upstream 89798 43518953 ~ 43519895 (-)
G33976 NA non-coding upstream 202404 43631559 ~ 43631854 (-)
G33981 NA non-coding upstream 245494 43674649 ~ 43680211 (-)
G34002 NA non-coding upstream 347393 43776548 ~ 43777594 (-)
G33847 NA other downstream 202336 43214634 ~ 43214987 (-)
G33796 NA other downstream 426553 42985223 ~ 42990770 (-)
G33711 NA other downstream 1015187 42399291 ~ 42402136 (-)
sirt3 sirt3 other downstream 1652427 41757627 ~ 41764896 (-)
LOC120556513 NA other downstream 2753666 40661364 ~ 40663657 (-)
G33914 NA other upstream 23557 43452712 ~ 43456847 (-)
LOC120556522 LOC103374105,LOC102297981 other upstream 337536 43766691 ~ 43813225 (-)
G34078 NA other upstream 611205 44040360 ~ 44089691 (-)
LOC120556527 LOC102787635,LOC101476187,LOC100691227,LOC106610718 other upstream 1362827 44791982 ~ 44915666 (-)
G34518 NA other upstream 1709501 45138656 ~ 45271013 (-)

Expression


Co-expression Network