kcnq1.1 (kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082)


Basic Information

Item Value
gene id kcnq1.1
gene name kcnq1,LOC101467915,LOC102292488,LOC102797067,LOC100697082
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 14101129 ~ 14153448 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039794094.1
CGGCATCACCTCAGCAACCCAGAGAGctgtaaagttaaattaaagaaaCGCCGTCCTGGTGATCTAGGGCATCACTAACTCAGTTGATTTGACATATTTATGCGCCCTGGTGAAATCAGGCGCAGAGCAGAAGGTAAGCGCACATGGGCGAACATTTGTCCGTTTGAGTCAGTGACCGAACATTTTACCACTGAGAAAAGTTAACCCATCGACAGAAGAATAACGGGGAAGCTGCAATGTCCAATTCCGCCCCCTATCAAGAGGGGAAGACACGGAGGTCTTCTGGTGTGGCACGTGGGAACAGACCACCGGATTTGGAGCTGTCGCAAACCACGTTTAGCGCGCCAGAACCGGGGACACCTGCGGGCAACGACGCGTTTTCTGAAAGAGACAAAATGCCAGAGGACGGTAACACTACCACAAATGTACCAACTGTTCACCTCCACCCGTACTTATCTCACCCCCGGATGTCTGTGCGGATGTCGGTGTACAGCACCGGGGTCCGTCCAATCCTCACCCGCGCCTACATCCAAGGACGCGTGTATAACTTTCTGGAAAGGCCGTCTGGCTGGAAATGCTTCGTGTATCACTtctcagtGTTTCTCATAGTTCTGGCCTGTCTGATCCTCAGTGTTCTGTCTACCATCGACCAGTACCAGGCCTTGGCTCACACAACACTCTTCTGGGTGGAGATCGTCCTTGTGGTGTTTTTCGGTGTGGAATATTTTGTCCGCCTCTGGTCAGCCGGCTGCCGCAGTAAATATGTTGGCATCTGTGGCCGACTACGCTTTGCTAGGAAGCCAATATCTATTATagATCTGATTGTAGTTGTTGCCTCAATAGTTGTGCTGTCAGTGGGCTCCAAAGGCCAGGTCTTTGCCACCTCTGCTGTAAGAGGGATTCGCTTCCTGCAGATCCTGCGAATGCTCCACGTGGACCGGCAGGGAGGAACCTGGCGTCTCCTCGGCTCCGTCGTCTTCATCCATCGGCAGGAGCTGATCACCACATTATACATTGGCTTTCTGAGCCTGATCTTCTCATCGTACTTTGTCTACCTGGCAGAGAAAGATGCAGTCGACAGCAGCGGCTCCTCAGAGTTTGGAAACTATGCTGATGCCCTGTGGTGGGGAGTGGTGACAGTGACTACCATTGGATATGGAGACAAAGTGCCACAAACCTGGATTGGAAAGACCATTGCATCCTGTTTCTCGGTCTTTGCCATTTCCTTCTTTGCTCTGCCTGCAGGAATCTTAGGCTCAGGCTTCGCCCTCAAGGTGCAGCAGaagcaaagacaaaaacacttCAACCGACAGATCCCTGCAGCTGCCTGTCTCATTCAGACATCATGGAGATGTTTTGCGGTGGAGAACTTTGATTCTGCCACATTCAAGAAGTTTTTGAGGAAGAGAACCAACATCCCCGCCTCCTCTCTGTCCACCCCCAAGCCCAAGAAATCGGTGAAGATAAGGAGGAAGTTGAAGAGCACTGACAAGGACAACAGTCCAGCGTCTCCCACAATCCCCAGCATCACCTACGACTCTGTATTTGACAGTGGGAGGGAGCTGAGTTCAGATGTTTACAGCACCGTGGGCACAGCAGGATCCCACGCTTTGGGAGGATGTGATTGCCAGCAGTCCTGGACGTCTTTGTCTTCCCTTCAGTTCACCTCACCGCCTCCAGTGAAAAGAAACCCTGGCCTTTTGGACGTCCACTCTCCGGGCCCCCTGAAGAGGAACTGCAGCTTTGCCGACGACCTGGAGCTGGAGCCAGAGCGAGACAATGAGCTGGCTCCTATCACCTCACTGTCACAATTGACGGAGTCACATCGGAAAGCCATCCGGGTGATCCAGAGAATGCGTTATTTTGTGGCCAAGAGAAATTTCCAGcAAGCTCGTAAGCCGTATGATGTGCGCGACGTGATCGAGCAATACTCCCAGGGCCACCTCAACCTCATGGTGCGAATCAAGGAGCTGCAAAGAAGACTGGACCAATCTATAGGGAAGATAACTTTGTTCCAGTCGGGCTCCGACCGAGCGAAAGACAAAGGCACCAACTCCATCGGATCCAGACTCAACAGGATGGAGGACAAGATAACGCACATGGACCAGACGCTAAGCCGCATCGCAGAGTCCCTCGCCTCTGTGCTGAGCCAGAGGAACGTCGGTGAGGGCGAAGGTGGAGGCGGGCCGAGGCCACGGCCTGGACGCACCTTCAATGTCCTCCCCAGCCAGGACAGCCTGCCAAGCTACGACCAGCTGTCTTCATCACCTTCGCCCTTCTCGTCCAACATCACCAGCACCGCAGCCTGCCCCAACCCTCCCCACAGAAGCACCGCCAGTCAGGATGAGAGCAGCTGAAACCTGGAAACCAAACAGCCTCAAAGTGATTCTCTTTTTAGTAGAATGTATAACATGTCAAATGCAGTttttactctgtctgtctgtctgtcagtctgtctgtccgcCCACCTGCCCACTCGCTGGTCAAAATAGATTGAAATGATATCCTTTAAGAcctaattctgactttttttttgatctttttttattaaaatgattaCTGTTTAAAGGAATACTTCACCCTCAAAATGACCATTTGTATGTCGATTACTCACCGAGTGCTGCCTTGGATTCATgagactttgtttttgttgcattcCTCCACTGTGCAAGAATCCAAAAAAACGGAGAAAGGTCCTGATGTATTCTACtgaattatgtattattattttattatgtattcTATTGAATTATGTAtgcgtttaaaggtgcagta
>XM_039794095.1
CGGCATCACCTCAGCAACCCAGAGAGctgtaaagttaaattaaagaaaCGCCGTCCTGGTGATCTAGGGCATCACTAACTCAGTTGATTTGACATATTTATGCGCCCTGGTGAAATCAGGCGCAGAGCAGAAGGTAAGCGCACATGGGCGAACATTTGTCCGTTTGAGTCAGTGACCGAACATTTTACCACTGAGAAAAGTTAACCCATCGACAGAAGAATAACGGGGAAGCTGCAATGTCCAATTCCGCCCCCTATCAAGAGGGGAAGACACGGAGGTCTTCTGGTGTGGCACGTGGGAACAGACCACCGGATTTGGAGCTGTCGCAAACCACGTTTAGCGCGCCAGAACCGGGGACACCTGCGGGCAACGACGCGTTTTCTGAAAGAGACAAAATGCCAGAGGACGGTAACACTACCACAAATGTACCAACTGTTCACCTCCACCCGTACTTATCTCACCCCCGGATGTCTGTGCGGATGTCGGTGTACAGCACCGGGGTCCGTCCAATCCTCACCCGCGCCTACATCCAAGGACGCGTGTATAACTTTCTGGAAAGGCCGTCTGGCTGGAAATGCTTCGTGTATCACTtctcagtGTTTCTCATAGTTCTGGCCTGTCTGATCCTCAGTGTTCTGTCTACCATCGACCAGTACCAGGCCTTGGCTCACACAACACTCTTCTGGGTGGAGATCGTCCTTGTGGTGTTTTTCGGTGTGGAATATTTTGTCCGCCTCTGGTCAGCCGGCTGCCGCAGTAAATATGTTGGCATCTGTGGCCGACTACGCTTTGCTAGGAAGCCAATATCTATTATagATCTGATTGTAGTTGTTGCCTCAATAGTTGTGCTGTCAGTGGGCTCCAAAGGCCAGGTCTTTGCCACCTCTGCTGTAAGAGGGATTCGCTTCCTGCAGATCCTGCGAATGCTCCACGTGGACCGGCAGGGAGGAACCTGGCGTCTCCTCGGCTCCGTCGTCTTCATCCATCGGCAGGAGCTGATCACCACATTATACATTGGCTTTCTGAGCCTGATCTTCTCATCGTACTTTGTCTACCTGGCAGAGAAAGATGCAGTCGACAGCAGCGGCTCCTCAGAGTTTGGAAACTATGCTGATGCCCTGTGGTGGGGAGTGGTGACAGTGACTACCATTGGATATGGAGACAAAGTGCCACAAACCTGGATTGGAAAGACCATTGCATCCTGTTTCTCGGTCTTTGCCATTTCCTTCTTTGCTCTGCCTGCAGGAATCTTAGGCTCAGGCTTCGCCCTCAAGGTGCAGCAGaagcaaagacaaaaacacttCAACCGACAGATCCCTGCAGCTGCCTGTCTCATTCAGACATCATGGAGATGTTTTGCGGTGGAGAACTTTGATTCTGCCACATTCAAGAAGTTTTTGAGGAAGAGAACCAACATCCCCGCCTCCTCTCTGTCCACCCCCAAGCCCAAGAAATCGGTGAAGATAAGGAGGAAGTTGAAGAGCACTGACAAGGACAACAGTCCAGCGTCTCCCACAATCCCCAGCATCACCTACGACTCTGTATTTGACAGTGGGAGGGAGCTGAGTTCAGATGTTTACAGCACCGTGGGCACAGGATCCCACGCTTTGGGAGGATGTGATTGCCAGCAGTCCTGGACGTCTTTGTCTTCCCTTCAGTTCACCTCACCGCCTCCAGTGAAAAGAAACCCTGGCCTTTTGGACGTCCACTCTCCGGGCCCCCTGAAGAGGAACTGCAGCTTTGCCGACGACCTGGAGCTGGAGCCAGAGCGAGACAATGAGCTGGCTCCTATCACCTCACTGTCACAATTGACGGAGTCACATCGGAAAGCCATCCGGGTGATCCAGAGAATGCGTTATTTTGTGGCCAAGAGAAATTTCCAGcAAGCTCGTAAGCCGTATGATGTGCGCGACGTGATCGAGCAATACTCCCAGGGCCACCTCAACCTCATGGTGCGAATCAAGGAGCTGCAAAGAAGACTGGACCAATCTATAGGGAAGATAACTTTGTTCCAGTCGGGCTCCGACCGAGCGAAAGACAAAGGCACCAACTCCATCGGATCCAGACTCAACAGGATGGAGGACAAGATAACGCACATGGACCAGACGCTAAGCCGCATCGCAGAGTCCCTCGCCTCTGTGCTGAGCCAGAGGAACGTCGGTGAGGGCGAAGGTGGAGGCGGGCCGAGGCCACGGCCTGGACGCACCTTCAATGTCCTCCCCAGCCAGGACAGCCTGCCAAGCTACGACCAGCTGTCTTCATCACCTTCGCCCTTCTCGTCCAACATCACCAGCACCGCAGCCTGCCCCAACCCTCCCCACAGAAGCACCGCCAGTCAGGATGAGAGCAGCTGAAACCTGGAAACCAAACAGCCTCAAAGTGATTCTCTTTTTAGTAGAATGTATAACATGTCAAATGCAGTttttactctgtctgtctgtctgtcagtctgtctgtccgcCCACCTGCCCACTCGCTGGTCAAAATAGATTGAAATGATATCCTTTAAGAcctaattctgactttttttttgatctttttttattaaaatgattaCTGTTTAAAGGAATACTTCACCCTCAAAATGACCATTTGTATGTCGATTACTCACCGAGTGCTGCCTTGGATTCATgagactttgtttttgttgcattcCTCCACTGTGCAAGAATCCAAAAAAACGGAGAAAGGTCCTGATGTATTCTACtgaattatgtattattattttattatgtattcTATTGAATTATGTAtgcgtttaaaggtgcagta
>XM_039794096.1
CGGCATCACCTCAGCAACCCAGAGAGctgtaaagttaaattaaagaaaCGCCGTCCTGGTGATCTAGGGCATCACTAACTCAGTTGATTTGACATATTTATGCGCCCTGGTGAAATCAGGCGCAGAGCAGAAGGTAAGCGCACATGGGCGAACATTTGTCCGTTTGAGTCAGTGACCGAACATTTTACCACTGAGAAAAGTTAACCCATCGACAGAAGAATAACGGGGAAGCTGCAATGTCCAATTCCGCCCCCTATCAAGAGGGGAAGACACGGAGGTCTTCTGGTGTGGCACGTGGGAACAGACCACCGGATTTGGAGCTGTCGCAAACCACGTTTAGCGCGCCAGAACCGGGGACACCTGCGGGCAACGACGCGTTTTCTGAAAGAGACAAAATGCCAGAGGACGGTAACACTACCACAAATGTACCAACTGTTCACCTCCACCCGTACTTATCTCACCCCCGGATGTCTGTGCGGATGTCGGTGTACAGCACCGGGGTCCGTCCAATCCTCACCCGCGCCTACATCCAAGGACGCGTGTATAACTTTCTGGAAAGGCCGTCTGGCTGGAAATGCTTCGTGTATCACTtctcagtGTTTCTCATAGTTCTGGCCTGTCTGATCCTCAGTGTTCTGTCTACCATCGACCAGTACCAGGCCTTGGCTCACACAACACTCTTCTGGGTGGAGATCGTCCTTGTGGTGTTTTTCGGTGTGGAATATTTTGTCCGCCTCTGGTCAGCCGGCTGCCGCAGTAAATATGTTGGCATCTGTGGCCGACTACGCTTTGCTAGGAAGCCAATATCTATTATagATCTGATTGTAGTTGTTGCCTCAATAGTTGTGCTGTCAGTGGGCTCCAAAGGCCAGGTCTTTGCCACCTCTGCTGTAAGAGGGATTCGCTTCCTGCAGATCCTGCGAATGCTCCACGTGGACCGGCAGGGAGGAACCTGGCGTCTCCTCGGCTCCGTCGTCTTCATCCATCGGCAGGAGCTGATCACCACATTATACATTGGCTTTCTGAGCCTGATCTTCTCATCGTACTTTGTCTACCTGGCAGAGAAAGATGCAGTCGACAGCAGCGGCTCCTCAGAGTTTGGAAACTATGCTGATGCCCTGTGGTGGGGAGTGGTGACAGTGACTACCATTGGATATGGAGACAAAGTGCCACAAACCTGGATTGGAAAGACCATTGCATCCTGTTTCTCGGTCTTTGCCATTTCCTTCTTTGCTCTGCCTGCAGGAATCTTAGGCTCAGGCTTCGCCCTCAAGGTGCAGCAGaagcaaagacaaaaacacttCAACCGACAGATCCCTGCAGCTGCCTGTCTCATTCAGACATCATGGAGATGTTTTGCGGTGGAGAACTTTGATTCTGCCACATTCAAGAAGTTTTTGAGGAAGAGAACCAACATCCCCGCCTCCTCTCTGTCCACCCCCAAGCCCAAGAAATCGGTGAAGATAAGGAGGAAGTTGAAGAGCACTGACAAGGACAACAGTCCAGCGTCTCCCACAATCCCCAGCATCACCTACGACTCTGTATTTGACAGTGGGAGGGAGCTGAGTTCAGATGTTTACAGCACCGTGGGCACAGATTGCCAGCAGTCCTGGACGTCTTTGTCTTCCCTTCAGTTCACCTCACCGCCTCCAGTGAAAAGAAACCCTGGCCTTTTGGACGTCCACTCTCCGGGCCCCCTGAAGAGGAACTGCAGCTTTGCCGACGACCTGGAGCTGGAGCCAGAGCGAGACAATGAGCTGGCTCCTATCACCTCACTGTCACAATTGACGGAGTCACATCGGAAAGCCATCCGGGTGATCCAGAGAATGCGTTATTTTGTGGCCAAGAGAAATTTCCAGcAAGCTCGTAAGCCGTATGATGTGCGCGACGTGATCGAGCAATACTCCCAGGGCCACCTCAACCTCATGGTGCGAATCAAGGAGCTGCAAAGAAGACTGGACCAATCTATAGGGAAGATAACTTTGTTCCAGTCGGGCTCCGACCGAGCGAAAGACAAAGGCACCAACTCCATCGGATCCAGACTCAACAGGATGGAGGACAAGATAACGCACATGGACCAGACGCTAAGCCGCATCGCAGAGTCCCTCGCCTCTGTGCTGAGCCAGAGGAACGTCGGTGAGGGCGAAGGTGGAGGCGGGCCGAGGCCACGGCCTGGACGCACCTTCAATGTCCTCCCCAGCCAGGACAGCCTGCCAAGCTACGACCAGCTGTCTTCATCACCTTCGCCCTTCTCGTCCAACATCACCAGCACCGCAGCCTGCCCCAACCCTCCCCACAGAAGCACCGCCAGTCAGGATGAGAGCAGCTGAAACCTGGAAACCAAACAGCCTCAAAGTGATTCTCTTTTTAGTAGAATGTATAACATGTCAAATGCAGTttttactctgtctgtctgtctgtcagtctgtctgtccgcCCACCTGCCCACTCGCTGGTCAAAATAGATTGAAATGATATCCTTTAAGAcctaattctgactttttttttgatctttttttattaaaatgattaCTGTTTAAAGGAATACTTCACCCTCAAAATGACCATTTGTATGTCGATTACTCACCGAGTGCTGCCTTGGATTCATgagactttgtttttgttgcattcCTCCACTGTGCAAGAATCCAAAAAAACGGAGAAAGGTCCTGATGTATTCTACtgaattatgtattattattttattatgtattcTATTGAATTATGTAtgcgtttaaaggtgcagta

Function

symbol description
kcnq1 Enables several functions, including calmodulin binding activity; protein kinase A binding activity; and voltage-gated potassium channel activity. Contributes to delayed rectifier potassium channel activity. Involved in several processes, including ion transmembrane transport; regulation of heart contraction; and regulation of ion transmembrane transport. Located in several cellular components, including basolateral plasma membrane; endosome; and membrane raft. Part of voltage-gated potassium channel complex. Implicated in heart conduction disease (multiple) and long QT syndrome (multiple). Biomarker of seminoma.

NR:

description
potassium voltage-gated channel subfamily KQT member 1 isoform X1

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0001822 kidney development biological_process
GO:0097205 renal filtration biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04926 KCNQ1, KV7.1; potassium voltage-gated channel KQT-like subfamily member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039794094.1 True 2775 mRNA 0.51 18 14101129 14153448
XM_039794095.1 False 2772 mRNA 0.51 18 14101129 14153448
XM_039794096.1 False 2748 mRNA 0.51 17 14101129 14153448

Neighbor

gene id symbol gene type direction distance location
trpm5 trpm5 coding downstream 10669 14062036 ~ 14090460 (-)
ttc17 ttc17,LOC103361721 coding downstream 52835 14017552 ~ 14048294 (-)
hsd17b12b hsd17b12,LOC103367509,LOC108234813,LOC106951467,LOC102212771 coding downstream 105814 13967714 ~ 13995315 (-)
LOC120555520 NA coding downstream 373659 13723593 ~ 13727470 (-)
chst1 chst1 coding downstream 694514 13402324 ~ 13406615 (-)
lingo1b LOC103361724 coding upstream 72329 14225777 ~ 14250332 (-)
muc15 NA coding upstream 485538 14638986 ~ 14654184 (-)
madd madd coding upstream 586744 14740192 ~ 14804767 (-)
nr1h3 nr1h3,LOC102777562 coding upstream 657997 14811445 ~ 14828395 (-)
LOC120556084 NA coding upstream 724574 14878022 ~ 14881139 (-)
G27277 NA non-coding downstream 96518 13997113 ~ 14004611 (-)
G27279 NA non-coding downstream 98382 14001850 ~ 14002747 (-)
G27230 NA non-coding downstream 347055 13753706 ~ 13754074 (-)
G27211 LOC104946114,LOC100698156 non-coding downstream 380533 13719198 ~ 13720596 (-)
G27210 NA non-coding downstream 388861 13708919 ~ 13712268 (-)
G27295 NA non-coding upstream 14109 14167557 ~ 14167758 (-)
G27297 NA non-coding upstream 16165 14169613 ~ 14169839 (-)
G27301 NA non-coding upstream 26679 14180127 ~ 14180348 (-)
G27309 NA non-coding upstream 70888 14224336 ~ 14225278 (-)
G27322 NA non-coding upstream 374394 14527842 ~ 14528127 (-)
G27075 LOC104939823,LOC100707594 other downstream 1005363 13069996 ~ 13095766 (-)
G26924 LOC108281047 other downstream 1796305 12304539 ~ 12304824 (-)
G26891 NA other downstream 2139357 11960701 ~ 11961772 (-)
LOC120555651 NA other downstream 2431860 11643231 ~ 11669269 (-)
mtfmt mtfmt,LOC102776665,LOC102776373 other downstream 2590829 11476506 ~ 11510300 (-)
G27321 NA other upstream 316310 14469758 ~ 14470345 (-)
LOC120556476 NA other upstream 424579 14578027 ~ 14580011 (-)
G27420 NA other upstream 689265 14842713 ~ 14843905 (-)
cfap70 LOC103368539,LOC102222702,LOC102790175,LOC102296598,LOC102204478,LOC104922799 other upstream 897214 15050662 ~ 15078830 (-)
LOC120556162 znf609 other upstream 1918121 16071569 ~ 16159882 (-)

Expression


Co-expression Network